| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0509 |
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| Symbol | |
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| ID | 3965623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 623119 |
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| End bp | 624492 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919572 |
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| Product | mannanase, putative |
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| Protein accession | YP_525985 |
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| Protein GI | 90020158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3934] Endo-beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0374435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACT ACTTAAAGCG CGCTGCCCTG TGCATGCTTG CGCTCGTTGC TGTGGCTTGC
GCCAAATCGC AGCCAGAAAC AAAAGTTGAA GAGCTGCCTG CCACCAAAAC TGCGGCAAAT
GCCGGTGTGG CAGCGACAGA GTTTGTGCAA GTAAATGGTG GCCGCTTTAC ATTGCGCGGG
CAGGACTACG CCTACATAGG CACTAATATG TGGTTTGCCG CGTATATTGG TTCTACCAAC
CCTGAATACG GCGATCGCGA GCGCCTAATT AAAGAACTCG ATTTATTAAA ATCCTTGGGT
GTGACCAACC TGCGTATTTT AGGAGCATCC GAAAAATCTC CATTGCGCGA TTCCATGAAA
CCGGCAATTA GTGAGCGCGG TGAAATTAAC CAGCACGATA TTTTAGAGGG CTTAGATTTT
GCGTTAGCTG AAATGGCTAA GCGCGATATG AAAGCCGTGA TATTTCTGAA TAACTTTTGG
GAATGGTCCG GCGGTATGGC GACTTACCTA AGCTGGGTTA ACGGTGGCGA AATTGTTGAT
ATGGCAGACC CCACCAAACC ATGGCCAGCT TTTGCACTTT TTTCAGCGGG GTTTTACTCT
AATGAAGAGG CGAAACAACT ATTCAATAAT TACCTTACAA AAGTTGTAAG CCGCCGCAAT
ACCATTACCG GCGAGTTGTA CGCTAACGAC CCCACTATTA TGTCTTGGCA GCTCGCTAAC
GAGCCGCGCC CAGGTAACGG CGATGTGAGC AAGTCTAACT TACCCGCCTA TTACGATTGG
ATAAGTAAAA CCACTCAGCT AATTAAAAGC ATTGCCCCTA AGCAGTTGGT GTCGATTGGT
AGCGAAGGTA CCATGGGCTG CTTAGAGTTG GATGAGTGCG TTATTACCGC CCACAAAGAA
ACAGGTATCG ACTACGTTAC ATTCCATATG TGGCTTAAAA ACTGGGGCTG GTTCGATGTG
CAAAACGCAG AGCAAACCTA CGACAGCGCA GTTGCTACTG CAGATAAATA TATCGATCAC
CACATTAAAC TGGCTAACGA GTTAAATATG CCGGTGGTGC TGGAAGAGTT TGGTATGGAG
CGCGACGGAG GTGAATTCTC CCCAGAAAGC GCGGTAACCT ATCGCGATAA ATTCTATGCC
TATGTGTTCG ATCGCCAAAT TAAAAGTATT CGCTCTGGCG GGCCGTTTGT AGGGTCCAAC
TTTTGGGCGT GGGGCGGTTA TGGCAAAGCC ATGCACGATG ATGCTGTATG GCGCAAAGGC
GATAAAACCT TTGTTGGTGA CCCGCCGCAG GAGCCGCAAG GTTTAAATGC GGTATTTGCT
TCCGATACTT CAACGCTGGA AGTGTTGAAG CAAGCGGCGG ACGCTATTCG GTAA
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| Protein sequence | MVNYLKRAAL CMLALVAVAC AKSQPETKVE ELPATKTAAN AGVAATEFVQ VNGGRFTLRG
QDYAYIGTNM WFAAYIGSTN PEYGDRERLI KELDLLKSLG VTNLRILGAS EKSPLRDSMK
PAISERGEIN QHDILEGLDF ALAEMAKRDM KAVIFLNNFW EWSGGMATYL SWVNGGEIVD
MADPTKPWPA FALFSAGFYS NEEAKQLFNN YLTKVVSRRN TITGELYAND PTIMSWQLAN
EPRPGNGDVS KSNLPAYYDW ISKTTQLIKS IAPKQLVSIG SEGTMGCLEL DECVITAHKE
TGIDYVTFHM WLKNWGWFDV QNAEQTYDSA VATADKYIDH HIKLANELNM PVVLEEFGME
RDGGEFSPES AVTYRDKFYA YVFDRQIKSI RSGGPFVGSN FWAWGGYGKA MHDDAVWRKG
DKTFVGDPPQ EPQGLNAVFA SDTSTLEVLK QAADAIR
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