| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0506 |
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| Symbol | |
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| ID | 3965620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 619329 |
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| End bp | 620327 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919569 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_525982 |
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| Protein GI | 90020155 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.549777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATA TTAGAGAAGT AGCGCGCGTT GCAGGGGTAT CTGTTGCGAC CGTATCGCGT
GCACTAAGCC ACCCAGAAAA AGTCTCGCCC GCTTCCATGA AAAAGGTTAA GCAGGCTATC
GAAGAAGTGA ACTACCGCCC CAATATGCTG GCGCGCAACT TTCGCTCAGC TAAGGCCTAT
TCCATAGTTG TGTTAGTACC CGATATCGCC AACCCGTTCT TTTCGCTGGT TATTCGCGCC
ATTGAAGATC AAGCCCAGAA GCGAGGCTAT GCTGTACTGC TTGGCGATAC ACAAGATTCC
GGCGCAAAAG AGAAAGAATA TATTCGCCTA GTAGAAACGC GCCTTGCCGA CGGCATTATT
CAACTGCGCC CCCATTCGCC AGACGCCCCC ACCAATAAAG CATTAGGCCT ACCCTACATA
AACCTGTGCG GCACCGAAGA CACACCTGGG CCGTGCATAC GAATAGATAA CGTATTGGCC
TCAAAGAATA TGGTGGATTA CCTTATTTCA CTAGACCACA AACGTATTGG CATAATTACT
GGCCTACGCG GCAACCCGCA CACCATGGAC CGCATGAAAG GCTACAAGCA AAGCTTAGCT
GAGGCAGGCA TTGAGTTTGA TGAACGCTTA ATTGCCGAGG GCGAATACAG TATTTGGTCT
GGCGTGAATG CGGCCAACAA ATTGTGCGGC CTAGACAAAC CACCAACCGC CATTATGTGC
ATGAATGACG AAATGGCCAT TGGCGCTGTG CAGTCACTAA AGTCGCACGG CTACGCCGTA
CCACAGGATA TTTCAGTAAC AGGGTTTGAC GATATTGATT ACGCTCGTTA CTGCGATCCA
CCCTTAACCA CCATCAGCCA ACCCGCTGAA GATATGGGTA AAATTGCGGT AGACTTGCTA
TTGCGCTTAA TTGAGGGTGA AGAACTATCT AAGGAAGAGC ACGTTTTACC TTACGATTTT
ATTGTGCGTA AAAGCACAGA CAAAGCTAAA GAAGGCTAA
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| Protein sequence | MSNIREVARV AGVSVATVSR ALSHPEKVSP ASMKKVKQAI EEVNYRPNML ARNFRSAKAY
SIVVLVPDIA NPFFSLVIRA IEDQAQKRGY AVLLGDTQDS GAKEKEYIRL VETRLADGII
QLRPHSPDAP TNKALGLPYI NLCGTEDTPG PCIRIDNVLA SKNMVDYLIS LDHKRIGIIT
GLRGNPHTMD RMKGYKQSLA EAGIEFDERL IAEGEYSIWS GVNAANKLCG LDKPPTAIMC
MNDEMAIGAV QSLKSHGYAV PQDISVTGFD DIDYARYCDP PLTTISQPAE DMGKIAVDLL
LRLIEGEELS KEEHVLPYDF IVRKSTDKAK EG
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