| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0500 |
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| Symbol | |
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| ID | 3965614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 612267 |
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| End bp | 613340 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919563 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_525976 |
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| Protein GI | 90020149 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000409707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAC AAGCAAACTT CCGACAAATA CTCGACAGCC TGATTACGGC AGTCATAGTG
CTGGAAGACG ATTTAAGCAT CGCCCACATT AACGCATCGG CAGAAATGCT GCTAAGCGTG
AGCGGCGAGC AGCTTGTCGG CAAGCCTATT CAAGAGTGCT TTTTCGAAAC CGACGGCACC
CCCATGTCAC TATCTGAAGC ATTGCGTGAA AATCGCAATT TCACCAAGCG CAAAGCGCGC
TGGAGCCTTC ACTCTCATCA AGAAATAACT GTCGACTATT CGGTTACCCC CAGCCCCGAA
ATGGGCAAGA TTATCTTAGA GGTGCAACCG CTAGATAGAT TGCTGCGCAT TAGTCGTGAA
GAAGCCCTAC TCTCTTCGCA AGAAACATCG CGCAACTTAA TTCGCAGCAT GGCCCACGAA
ATTAAAAACC CCTTAGGCGG CATTCGCGGG GCGGCTCAGC TGCTCTCTCG CGAACTGCAA
GATGAAGACC TCGATGAATA CACGCGCATT ATCATCGACG AAACAGACAG ATTAAGAAAC
CTTGTGGACC GCATGCTGGG GCCGCGCACA TTGCCCAAAA ACGAAGAAAC AAATATCCAC
GAAGTATTGG AACACGTAGC AGCGGTAATC AAGGCCGAAA TTGGCGGTGC GGTAAAATTG
CGCCGCGACT ACGACCCAAG TATTCCCGAA GTACTGGGCG ATAAAGAAAT GCTTATTCAG
GCCACGCTGA ACATTGTGCG CAACGCCGTA CAAGCACTAA TGGAAAACAG CAACCAAGAA
AAGCCGCCAG AAGTAAAACT AAGCACCCGC GTGCAGCGCC GCTACACCAT TGGCAGGGCG
CACTTTCCGC TGGTAGCGCG CATTGGCATT GAAGACAACG GCCCGGGCAT ACCGCCAGAA
ATAATCGAAG ACATATTCTT CCCCATGATA ACGGGGAGAG CGGAAGGCAC CGGCCTAGGC
CTAGCCATTT CGCAAAATTT AATAGGCCAG CACAACGGCC TTATAGAATG CGAGAGCGAG
CCGGGCAGAA CCGAGTTCGC CATATACTTA CCCTTGGGAA ATCACTATGC ATAA
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| Protein sequence | MVEQANFRQI LDSLITAVIV LEDDLSIAHI NASAEMLLSV SGEQLVGKPI QECFFETDGT
PMSLSEALRE NRNFTKRKAR WSLHSHQEIT VDYSVTPSPE MGKIILEVQP LDRLLRISRE
EALLSSQETS RNLIRSMAHE IKNPLGGIRG AAQLLSRELQ DEDLDEYTRI IIDETDRLRN
LVDRMLGPRT LPKNEETNIH EVLEHVAAVI KAEIGGAVKL RRDYDPSIPE VLGDKEMLIQ
ATLNIVRNAV QALMENSNQE KPPEVKLSTR VQRRYTIGRA HFPLVARIGI EDNGPGIPPE
IIEDIFFPMI TGRAEGTGLG LAISQNLIGQ HNGLIECESE PGRTEFAIYL PLGNHYA
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