| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0479 |
|---|
| Symbol | |
|---|
| ID | 3967997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 590848 |
|---|
| End bp | 591990 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637919542 |
|---|
| Product | signal transduction ATPase |
|---|
| Protein accession | YP_525955 |
|---|
| Protein GI | 90020128 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATGT CGTTGAAAAA TTTTATAAAA CAGCTATCTA AAAGCCGCCA CTTACAATAT
TGGTTTTTGC AATTTGTAGG TTGGACCGGC TTGGCCATAT ACACCTTGTT ATCGCTTACC
CTTTACTATC AAGCGAACCC TGAGTGGAAG CACATCGCTC ATACCTTTTT ACAATCGCCA
CTTGGCCTTA TTATTTCTTT GCCCTTGCGG CCCTTATACC TGCGTATTTG GCACTGGTCG
CTTATGGCGC GCCTGTTGGT GGTGTCGCTT GCGGTATTGG TATGCGCATT TATTTGGACT
GTTACCCGCA TGTTACTATT TATGTGGATG GCAGATGCAG AAGGGTTGTT TCAATCAGAT
TTTGGGGGCT GGTTTTTCCC CGGTATGTTT GTATACCTAA GTTGGACCTT GCTGTTTTAC
TGTATTCACT ACTATCAACT GCAACAAGAA GAACACCTCA TTGCAGTGGA TTTAGCCGCG
CAGCGCCAAG AGGAATATTT AAAGCGGCTA AAAGCAGAAA CCATAGCCAA AGAGGCGCAG
TTAAAAATGC TGCGCTACCA AATTAATCCC CATTTTTTAT TTAATACCCT TAACGCAATT
AAAGGCTTGG TGTACTTAAA AGAAAACGAC GTAGCCGCAG ATATGATTCT GCGCTTGTCC
ACTTTTTTGC GTTATTCGTT AGAAAGTAAC CCTCTGCTTA ATATCTCACT AGAAAAGGAG
GTGGAATCGC TTAAAGTGTA TTTGGATATA GAAGTGGTGC GGTTTGCCGA GCGCTTAAAA
GTAGAGTACA AAATAACGGA CAAAGCCAAA AAAGCCAGTG TGCCGAGTAT GATTTTGCAA
CCTATAGTAG AAAATGCTAT TAAATATGCC ATAGCCCCAA GTGAAAATGG GGGTACTATA
GAGATTAAAG GCTGGGTAGA CGATACATTC CTATGCATAG CCGTATGTGA CGATGGCCCA
GGAATAGGCT TTACAACCCC CGCAGACAAG CCCGAAGGCT GCGGCGTAGG CCTGCAAAAC
ACCCAAGAGA GGCTAGTGAC CCTCTATGAG GACGATTACC AATTTACCTT ATCTAACAAA
GCCGGGGGTG GGTTAAGGGT GTATATTAGG GTTCCTTACC AAACGGTAGT AGCTAGTAGC
TAA
|
|---|
| Protein sequence | MPMSLKNFIK QLSKSRHLQY WFLQFVGWTG LAIYTLLSLT LYYQANPEWK HIAHTFLQSP
LGLIISLPLR PLYLRIWHWS LMARLLVVSL AVLVCAFIWT VTRMLLFMWM ADAEGLFQSD
FGGWFFPGMF VYLSWTLLFY CIHYYQLQQE EHLIAVDLAA QRQEEYLKRL KAETIAKEAQ
LKMLRYQINP HFLFNTLNAI KGLVYLKEND VAADMILRLS TFLRYSLESN PLLNISLEKE
VESLKVYLDI EVVRFAERLK VEYKITDKAK KASVPSMILQ PIVENAIKYA IAPSENGGTI
EIKGWVDDTF LCIAVCDDGP GIGFTTPADK PEGCGVGLQN TQERLVTLYE DDYQFTLSNK
AGGGLRVYIR VPYQTVVASS
|
|---|
| |