| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0472 |
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| Symbol | |
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| ID | 3967990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 575670 |
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| End bp | 577673 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919535 |
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| Product | transketolase |
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| Protein accession | YP_525948 |
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| Protein GI | 90020121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0841196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC GCAGAGAACT TGCGAATGCC ATCCGTGCAT TAAGTATGGA CGCCGTACAA
AAAGCAAATA GTGGTCACCC AGGTGCACCA ATGGGAATGG CCGATATTGC GGAAGTGCTG
TGGAATGACT TCCTCAAGCA CAACCCAAGC AACCCTAATT GGGCCGATCG CGACCGTTTT
GTATTGTCAA ACGGCCACGG CTCTATGCTT ATTTATTCTT TGTTGCACCT TAGCGGTTAC
GACTTGCCAA TGAGCGAGTT GGCTCAGTTC CGTCAGTTGC ACTCTAAAAC CCCAGGTCAC
CCAGAGTTGG GTTATACCCC AGGTGTAGAA ACTACCACTG GCCCACTTGG CCAAGGTATC
AGTAACGCCG TAGGTATGGC GCTTGCCGAA AAAATGTTGG CTGCGCAGTT TAACCGCGAT
GGTCACGATA TTGTTGATCA CTACACCTAC TGCTTTTTAG GTGATGGCTG TTTGATGGAA
GGTGTTTCTC ACGAAACCTG TTCACTTGCT GGCACCTTGG GCTTGGGCAA ATTAATTGCC
TTTTGGGACG ACAACGGTAT TTCTATTGAT GGTCACGTAG AAGGCTGGTT TACCGATAAT
ACCCCAGCAC GTTTTGAAGC TTATGGCTGG CATGTTATCC CAGCGGTAGA TGGTCACGAC
CCAGAAGCTA TTAAAGCGGC GGTAGAAGCT GCGCAAGCAG AAACAGGCAA GCCAACGTTG
ATTTGTACTA AAACCACCAT TGGTTTTGGT TCACCTAACA AGAGCGGTTC TCACGATTGT
CACGGCGCAC CATTAGGCGA TGCAGAAATT GCCGCAGCGC GCGAATTTTT GGGCTGGCCT
CATGCGCCAT TCGAAATTCC AGACAACGTT TACGCTGGTT GGGATGCGAA AGAAAAAGGT
GCAGCGGCAC AGTCTGCATG GGAAGCCAAG TTTGAAGCAT ACAAGGCTGC ACAGCCCGCT
TTGGCGGCCG AGTTTGAGCG CCGCGTATTA AACGGTGACT TGCCTGCAGA TTTCGAAGCT
AAAGCCGATG CGTTTATTAA AGCTGTTAAC GAAAAAGGCG AAAGCATTGC CACCCGTAAA
GCGTCACAAA ACACTATTGC AGAATTTGGC GCTGCATTGC CAGAGCTACT CGGTGGCTCT
GCCGATTTGG CTGGCTCTAA CCTCACCATG TGGAGCGGTT CTAAGCCTGT TACGCGCGAA
GATGCCAGCG GCAACTATAT TTACTACGGT GTGCGTGAAT TTGGTATGAG CGCCATTATG
AATGGTATTG CTGCTCACGG TGGCTTTATT AACTACGGCG CAACCTTCTT AATGTTTATG
GAATACGCGC GCAACGCTGT GCGTATGTCT GCATTGATGA AGTTGCCAAA TATTTTTGTT
TACACCCACG ATTCCATTGG TCAGGGTGAA GACGGCCCAA CTCACCAGCC TATCGAGCAG
TTGGCCGCGT TGCGTTTAAC GCCAAACCTA AATACTTGGC GCCCAGCGGA TGCAGTTGAA
TCTGCGGTTG CTTGGAAATC TGCAGTAATG CGTAAAGACG GCCCAAGCGC ATTGGTATTT
ACCCGTCAAG GCGTTAAGGC GCAAAGCCAC GACGACGAGC AAATAGCCAA CATGGCGCGC
GGTGCATACG TACTAGTAGA TTGCGACGGC GAGCCAGAAG TGATGCTAAT TGCCACTGGT
TCTGAAGTGG GTATTACCGT AGATGCCGCA GCACAGCTAG CGGGTGAAGG CGTGAAGGTG
CGTGTTGTAT CCATGCCTTG TACCAATGTG TTCGATCAGC AAGATGCCGC CTACAAAGAA
TCTGTATTAC CTATTGCGGT TACCCATCGC GTAGCGGTAG AAACGTCACA CGTTGACTAC
TGGGCGAAAT ACGTAGGCAT TGATGGCCGC GTAGTGGGCA TGACCACCTT CGGTGAATCT
GCACCGGGTG GCGCATTGCT TGAGTACTTC GGTTTTACTG TAGAAAACGT CGTAAACACC
GTTAAAGAAT TGCTAGAAGA CTAA
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| Protein sequence | MSSRRELANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNDFLKHNPS NPNWADRDRF
VLSNGHGSML IYSLLHLSGY DLPMSELAQF RQLHSKTPGH PELGYTPGVE TTTGPLGQGI
SNAVGMALAE KMLAAQFNRD GHDIVDHYTY CFLGDGCLME GVSHETCSLA GTLGLGKLIA
FWDDNGISID GHVEGWFTDN TPARFEAYGW HVIPAVDGHD PEAIKAAVEA AQAETGKPTL
ICTKTTIGFG SPNKSGSHDC HGAPLGDAEI AAAREFLGWP HAPFEIPDNV YAGWDAKEKG
AAAQSAWEAK FEAYKAAQPA LAAEFERRVL NGDLPADFEA KADAFIKAVN EKGESIATRK
ASQNTIAEFG AALPELLGGS ADLAGSNLTM WSGSKPVTRE DASGNYIYYG VREFGMSAIM
NGIAAHGGFI NYGATFLMFM EYARNAVRMS ALMKLPNIFV YTHDSIGQGE DGPTHQPIEQ
LAALRLTPNL NTWRPADAVE SAVAWKSAVM RKDGPSALVF TRQGVKAQSH DDEQIANMAR
GAYVLVDCDG EPEVMLIATG SEVGITVDAA AQLAGEGVKV RVVSMPCTNV FDQQDAAYKE
SVLPIAVTHR VAVETSHVDY WAKYVGIDGR VVGMTTFGES APGGALLEYF GFTVENVVNT
VKELLED
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