| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0467 |
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| Symbol | |
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| ID | 3967985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 569625 |
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| End bp | 570350 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919530 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_525943 |
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| Protein GI | 90020116 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATTC CCCGCATCTA TATCGACAAA CCGATTACCG CCAATGCAAA CCTAGACCTA
GATGGCCCAA CGGCTCACTA CTTATTAAAA GTACTGCGGA TGGAAAGCGG GCGTGAACTT
ATTTTATTTA ATGGTAAGGG CGGTGAATAC AGCGCGGTAA TAGAAAGCGC AGGTAAAAAA
AATGTTTTCT GCAAAGTTGG TAAACACAAC ACCCGCGAAA GCGAAAGTAG CCTACAAACG
GAATTAGCTA TTGGTATATC TCGGGGCGAC CGAATGGATT GGGTTTTGCA AAAAGCCACC
GAGCTTGGCG TTAGCCGTAT AATACCGCTA TTTGCGGACC GATCTGAAGT TAAATTGAAA
GGCGAGCGCC TAGAAAAGAA AATGCAACAT TGGCAGCAAA TACTCATCTC AGCCTGCGAG
CAATGTACAC GTAACACCTT GCCAACATTA CTACCAGCTT GCCCTCTTGA TGAGTACTTA
GCCTCGACAC AAGCCGAACA AAAGTTCGTG CTACATCACC GCACCCACAA AAAATTGCGT
GACATAACCA AACCTAAGAG CGCAGCTCTA CTCATTGGCC CAGAAGGCGG CTTGACCGAT
AACGAAATCC AAAATGCCGA ACGAAAAGGC TTTAATGCAT TAGCACTAGG CCCTCGAATA
CTAAGAACAG AAACAGCCCC TATCGCAGCG CTATCTATTC TGCAATTTGT TTGGGGGGAT
GTTTAA
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| Protein sequence | MRIPRIYIDK PITANANLDL DGPTAHYLLK VLRMESGREL ILFNGKGGEY SAVIESAGKK
NVFCKVGKHN TRESESSLQT ELAIGISRGD RMDWVLQKAT ELGVSRIIPL FADRSEVKLK
GERLEKKMQH WQQILISACE QCTRNTLPTL LPACPLDEYL ASTQAEQKFV LHHRTHKKLR
DITKPKSAAL LIGPEGGLTD NEIQNAERKG FNALALGPRI LRTETAPIAA LSILQFVWGD
V
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