| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0439 |
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| Symbol | |
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| ID | 3967101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 542084 |
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| End bp | 542524 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637919502 |
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| Product | transketolase |
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| Protein accession | YP_525915 |
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| Protein GI | 90020088 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2153] Predicted acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTCG AACTGATAGA GAAAGATAGC CTAATTTATC AAAAAGCCTT AATGCTTCGA
TATGACCTAT TTTTCAAAGA GCATAACTTG CCCTTTGAAA TTCTCAAAGA CGAAAACGAG
GATAAAAGCT TCCATCTAGC CGCGTTCAAT GAAGAATCTT TAGTGGGTTA CAGCCGTCTT
ACTCGCTTCA GTCGTGATAG CTTTCAAATA TCACAAATGG TTGTGTCGTC GAATTTTCAA
GGTAAGGGTT GTGGTAGCCA AATGCTTTCA AAACTTATAC AACTTGCACT AGGCCAAGGT
GCAAAGAAAA TATCATTAAA TGCACGTAAA TCGGCAATAG GTCTTTATGC TAGGCAAGGC
TTTAATTGTG TAGGGGCGTA TTTTTTCTCA AAACGTACAG GCGTTCAGCA TATACAAATG
GTTTACCATG CAAACACATA A
|
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| Protein sequence | MKVELIEKDS LIYQKALMLR YDLFFKEHNL PFEILKDENE DKSFHLAAFN EESLVGYSRL
TRFSRDSFQI SQMVVSSNFQ GKGCGSQMLS KLIQLALGQG AKKISLNARK SAIGLYARQG
FNCVGAYFFS KRTGVQHIQM VYHANT
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