Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0435 |
Symbol | |
ID | 3967097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 537817 |
End bp | 538845 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637919498 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_525911 |
Protein GI | 90020084 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA AACGAAGAAT ACTAGCCATA AGAATCACAT TGCTTATTGG AACTATCATT TCACTATTCT TCGTGCCATG GATTTTAGTA AAGGCTTGGA TTTTACCGTT ACCCGATACA GTTCAAGAGC AGGTGGATGA GGCTATTGGA CACGGATTTG ATGGCATGAT TGTTTATGTG GACGAAGCAG GAAAACCTCC AGCGTTTTAC ACCGGTGGCT GGAAAGATCG AGAAAATAAA AAATCAGCAG ACGCAAATTC CTTATTCAAA ATTGCCAGTA TTAGCAAATT GTATACGGCG GTAGCTGTAA CAAAATTGGT CAAAGAAAAG CGATTATCCC TCGACGCACC CCTTGTAGAT TACCTTCCAG AACTTAGAGG AAGAATCGCA AATTCAGAAC AAATTACCTT AAAAATGATG GTTCAACATA GATCTGGAAT TCCCAATTTC ACAGATAATC CTGATTATTG GGAAAACGAA CAGCAAAATG GTCATGCAGC CCTTGATTTT GCGCTCGACT TACCGCCGAG TTTTGAGCCC GACGAAGGTT ATCAATATTC CAATACTAAT TATTTGCTGC TTCGCAACAT CATGGATGAG GTATTAGGAT ATAGCCACCA GCAATATATT AAGGAAAAAA TATTGATCCC CCTCGAATTG AATAACACTT ATTTTTCAAT AAAGGAAGTT GACCTTGATG ATGTAATGAG TGGGTATTAC GTTGGACATG AGGAAGATTT TAAAGCTCGC GAGTATGGAA TGTTAGCTAC GGCAGAGGAT GTGGGTATCT TCTTGCGTGC CTTAAACGAT GGCTCAGTAT TTGAAGAAGG AGAAGAGGAA ATCTATCCTT ATGTCTACGA TCATGGAGGT TTGGTTGTCG GCTATCAGAG CCTCGCAAAA TACAACAAAG ATCTAGATGC GGTAGTGGTT CAATTTATTA ATACGACGGA TTTTAACGGA TATGAATGGA ATTTATCTGA AATTATAATT AACCGTATTA TTAAAATACT GAGCAGAAAA AACTCATAA
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Protein sequence | MKKKRRILAI RITLLIGTII SLFFVPWILV KAWILPLPDT VQEQVDEAIG HGFDGMIVYV DEAGKPPAFY TGGWKDRENK KSADANSLFK IASISKLYTA VAVTKLVKEK RLSLDAPLVD YLPELRGRIA NSEQITLKMM VQHRSGIPNF TDNPDYWENE QQNGHAALDF ALDLPPSFEP DEGYQYSNTN YLLLRNIMDE VLGYSHQQYI KEKILIPLEL NNTYFSIKEV DLDDVMSGYY VGHEEDFKAR EYGMLATAED VGIFLRALND GSVFEEGEEE IYPYVYDHGG LVVGYQSLAK YNKDLDAVVV QFINTTDFNG YEWNLSEIII NRIIKILSRK NS
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