Gene Sde_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0435 
Symbol 
ID3967097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp537817 
End bp538845 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content39% 
IMG OID637919498 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_525911 
Protein GI90020084 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA AACGAAGAAT ACTAGCCATA AGAATCACAT TGCTTATTGG AACTATCATT 
TCACTATTCT TCGTGCCATG GATTTTAGTA AAGGCTTGGA TTTTACCGTT ACCCGATACA
GTTCAAGAGC AGGTGGATGA GGCTATTGGA CACGGATTTG ATGGCATGAT TGTTTATGTG
GACGAAGCAG GAAAACCTCC AGCGTTTTAC ACCGGTGGCT GGAAAGATCG AGAAAATAAA
AAATCAGCAG ACGCAAATTC CTTATTCAAA ATTGCCAGTA TTAGCAAATT GTATACGGCG
GTAGCTGTAA CAAAATTGGT CAAAGAAAAG CGATTATCCC TCGACGCACC CCTTGTAGAT
TACCTTCCAG AACTTAGAGG AAGAATCGCA AATTCAGAAC AAATTACCTT AAAAATGATG
GTTCAACATA GATCTGGAAT TCCCAATTTC ACAGATAATC CTGATTATTG GGAAAACGAA
CAGCAAAATG GTCATGCAGC CCTTGATTTT GCGCTCGACT TACCGCCGAG TTTTGAGCCC
GACGAAGGTT ATCAATATTC CAATACTAAT TATTTGCTGC TTCGCAACAT CATGGATGAG
GTATTAGGAT ATAGCCACCA GCAATATATT AAGGAAAAAA TATTGATCCC CCTCGAATTG
AATAACACTT ATTTTTCAAT AAAGGAAGTT GACCTTGATG ATGTAATGAG TGGGTATTAC
GTTGGACATG AGGAAGATTT TAAAGCTCGC GAGTATGGAA TGTTAGCTAC GGCAGAGGAT
GTGGGTATCT TCTTGCGTGC CTTAAACGAT GGCTCAGTAT TTGAAGAAGG AGAAGAGGAA
ATCTATCCTT ATGTCTACGA TCATGGAGGT TTGGTTGTCG GCTATCAGAG CCTCGCAAAA
TACAACAAAG ATCTAGATGC GGTAGTGGTT CAATTTATTA ATACGACGGA TTTTAACGGA
TATGAATGGA ATTTATCTGA AATTATAATT AACCGTATTA TTAAAATACT GAGCAGAAAA
AACTCATAA
 
Protein sequence
MKKKRRILAI RITLLIGTII SLFFVPWILV KAWILPLPDT VQEQVDEAIG HGFDGMIVYV 
DEAGKPPAFY TGGWKDRENK KSADANSLFK IASISKLYTA VAVTKLVKEK RLSLDAPLVD
YLPELRGRIA NSEQITLKMM VQHRSGIPNF TDNPDYWENE QQNGHAALDF ALDLPPSFEP
DEGYQYSNTN YLLLRNIMDE VLGYSHQQYI KEKILIPLEL NNTYFSIKEV DLDDVMSGYY
VGHEEDFKAR EYGMLATAED VGIFLRALND GSVFEEGEEE IYPYVYDHGG LVVGYQSLAK
YNKDLDAVVV QFINTTDFNG YEWNLSEIII NRIIKILSRK NS