| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0416 |
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| Symbol | |
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| ID | 3965992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 513145 |
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| End bp | 514806 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919479 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_525892 |
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| Protein GI | 90020065 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAT ACGTATTCAC TATGAATCGA GTGGGAAAAA TTGTTCCCCC AAAACGCGAA
ATTCTTAAGG ATATCTCCCT TTCTTTCTTC CCTGGCGCCA AAATTGGTGT TTTAGGCTTG
AACGGTGCGG GTAAATCGAC GCTTTTGCGC ATTATGGCAG GCGTGGATCA GGACTATATT
GGTGAAGCGC GCCCCATGCC CGATATTAAA GTGGGGTATT TGCAGCAGGA ACCTCAGCTG
AACCCAGAAA AGGACGTGCG CGGTAACGTA TTAGAAGGCA TGCAAGAGGC CGTAGATGCT
CTGGCCGAAC TAGACCGCGT TTACGCCGCT TACGCCGAGC CGGATGCCGA CTTTGACGCA
TTGGCCAAAA CCCAAGCGCG TATGGAAGAC ATTATTCAGG CGTGGGATGC CCACAACATG
GAGCACACCC TAGAAGTTGC CGCCGATGCA TTGCGCCTAC CGCCTTGGGA TGCCGATGTA
ACCAAACTCT CTGGTGGTGA AAAGCGCCGC GTCGCCCTGT GTCGCCTACT GCTTTCTAAG
CCAGACATGC TACTGCTCGA CGAGCCAACC AACCACTTGG ATGCCGAATC TGTTTACTGG
TTAGAGCGCT TCTTAAAAGA CTTTACCGGC ACAGTGGTAG CCATTACCCA CGATCGCTAC
TTTTTGGATA ACGCTGCAGG CTGGATATTG GAGCTCGACC GCGGTCACGG TATTCCCTAT
GAAGGTAACT ATTCCGATTG GCTAGACGCG AAAGAAAAGC GCCTAGCGCA GGAAGAGCGC
GGCGAAGCTG CGCGTAAAAA AGCGATAAAA GCAGAATTGG AATGGGTACG TCAAAACCCT
AAGGGCCGCC AAGCCAAGAG CAAGGCACGT TTAGCGCGTT TTGAAGAAAT GCAATCGCAG
GATTTCCAAT CTCGTAACGA AACCAACGAA ATTTACATTC CACCCGGCGA GCGCTTGGGT
GACAAAGTGA TTGAGTTTAA AGGCGTAAGC AAAGGCTACG GCAAAGAGTT ACTTATCGAT
AACCTTAGCT TTTCAATTCC CAAGGGCGCC ATTGTGGGCA TTGTGGGCGG TAACGGCGCG
GGTAAATCCA CCCTGTTTAG AATGATTGCC GGCCAAGAGC AACCCGATAG CGGTACCATT
GAGCTGGGCG AAACAGTAAA AGTGGCTTTT GTTGACCAAA GTCGCGACAA CCTAGACGAC
GATAAGAGCG TGTGGGAAGC GGTTTCTGGT GGCTCTGATA TTTTAAAAAT AGGCAATTAC
GAAGTGGGCT CGCGCGCGTA TATCGGTCGC TTTAACTTTA AAGGTAACGA CCAGCAAAAA
CGTGTGGGTG ATTTATCTGG TGGTGAACGC GGCCGCTTAC ATTTGGCCAA CACCTTAAAG
CAAGGCGCAA ACGTTTTGCT ACTGGATGAG CCATCGAACG ATTTGGATAT TGAAACCCTG
CGCGCACTAG AAGAAGCCAT TCAAACCTTC CCCGGCAGCG CACTGATTAT TTCGCATGAC
CGCTGGTTCT TAGATCGCGT AGCCACCCAT ATTTTAGCTT ACGAAGGCGA TAGCGAAATT
GTATTCTTTG AAGGTAACTA CACCGAATAC CACGAAGACT TTGTTGCCCG CAAAGGCGAA
AACGCCCAAC CGCGCAGAGT GAAATACAAA TCGTTGAAAT AA
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| Protein sequence | MAQYVFTMNR VGKIVPPKRE ILKDISLSFF PGAKIGVLGL NGAGKSTLLR IMAGVDQDYI
GEARPMPDIK VGYLQQEPQL NPEKDVRGNV LEGMQEAVDA LAELDRVYAA YAEPDADFDA
LAKTQARMED IIQAWDAHNM EHTLEVAADA LRLPPWDADV TKLSGGEKRR VALCRLLLSK
PDMLLLDEPT NHLDAESVYW LERFLKDFTG TVVAITHDRY FLDNAAGWIL ELDRGHGIPY
EGNYSDWLDA KEKRLAQEER GEAARKKAIK AELEWVRQNP KGRQAKSKAR LARFEEMQSQ
DFQSRNETNE IYIPPGERLG DKVIEFKGVS KGYGKELLID NLSFSIPKGA IVGIVGGNGA
GKSTLFRMIA GQEQPDSGTI ELGETVKVAF VDQSRDNLDD DKSVWEAVSG GSDILKIGNY
EVGSRAYIGR FNFKGNDQQK RVGDLSGGER GRLHLANTLK QGANVLLLDE PSNDLDIETL
RALEEAIQTF PGSALIISHD RWFLDRVATH ILAYEGDSEI VFFEGNYTEY HEDFVARKGE
NAQPRRVKYK SLK
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