| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0406 |
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| Symbol | |
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| ID | 3965982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 502403 |
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| End bp | 503767 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637919469 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_525882 |
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| Protein GI | 90020055 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.509389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAAGC AAAAAACCGG CTACGTATGT ACCGATTGCG GCGCAGATTA CTCCAAGTGG
CAAGGACAGT GCGCCGAATG TGGCCAGTGG AATACCGTAC AAGAAGTGCG CTTGGGCGCG
GCTACAAGTA GTCGCAGTGC AAGCCAAGCG GGCTACGCAG GGCAGGGTTT ATCTAAGGTT
ACGCCCCTCG CCGAAATAGA TTTGGCCGAG TTGCCGCGTA TTGCCAGTGG TATGGATGAA
TTAGACCGCG TACTGGGTGG CGGCTTTGTG CCCGGCTCGG TGGTGCTTAT TGGTGGCAAC
CCTGGTGCGG GTAAATCAAC GCTGCTACTG CAAACTCTTT GTCATTTATC GCAAAAACAC
CCTGCGCTAT ACGTAACCGG TGAGGAATCG CTGCAACAGG TGGCAATGCG CGCGCAGCGT
TTAGGGTTAC CTACCGACAA ACTCCAGCTT TTATCTGCCA CCGATGTCGA TGCACTCTTG
GCCAGTGCCG ACCAAGTTAA ACCCAAACTT ATGGTGGTGG ATTCTATTCA GGTAATGCAT
CACGCCGATA TTCAATCTGC CCCAGGCAGT GTGTCGCAGG TGCGCGAATC AGCTGCAGCG
CTCACTCGCT ACGCCAAACA AACCGGCACA GTGCTTATTT TGGTGGGACA TGTAACCAAA
GATGGCAGCC TTGCCGGCCC GAAAGTGCTC GAGCACATTA TCGATTGCTC CATCATGATA
GAAGGCTCTA ATGACAGTCG GTTTCGCACC TTGCGCGGCA GTAAAAACCG CTTTGGCGCG
GTGAACGAGC TGGGGGTGTT TGCCATGACC GAGCAGGGCT TAAAAGAGGT GTCTAACCCG
TCGGCTATTT TCTTGCAGCG CTCCGACGAA GTGGCCTCTG GCTCGGTAGT CATGGTGGTG
TGGGAAGGCA CGCGCCCGCT GTTGGTCGAA ATACAAGGCT TGGTGGATAT GTCGAGCTTG
GGTAACCCGC GCCGCGTTGC GGTAGGGCTA GAGCAAAACC GGCTGGCGAT GTTACTAGCG
GTGCTGCACC GCCACGGCGG CATTATGGTT GGCGATCAAG ATGTGTTTGT AAACGTTGTG
GGCGGTGTGA AAATTGTAGA AACCAGTGCC GACTTGGCGT TGTTGTTGGC GCTGGTGTCG
AGCTTTAGGG ATCAACCCCT ACCGCGCGAC TTAGTGGTAT TTGGCGAAGT GGGCCTAGCG
GGGGAGATTC GCCCCGTGCC CAGTGGCCAA GAGCGCCTGC GCGAAGCGGC CAAGCACGGC
TTTAAAAAAG CAATCGTTCC CGCCAACAAC GTCCCGCGCG AACCTATCAA GGGGTTGGAA
ATTGTCGCAG TCAAAAAACT AAGCGAAGCC CTAGAAGCCA TTTAG
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| Protein sequence | MAKQKTGYVC TDCGADYSKW QGQCAECGQW NTVQEVRLGA ATSSRSASQA GYAGQGLSKV
TPLAEIDLAE LPRIASGMDE LDRVLGGGFV PGSVVLIGGN PGAGKSTLLL QTLCHLSQKH
PALYVTGEES LQQVAMRAQR LGLPTDKLQL LSATDVDALL ASADQVKPKL MVVDSIQVMH
HADIQSAPGS VSQVRESAAA LTRYAKQTGT VLILVGHVTK DGSLAGPKVL EHIIDCSIMI
EGSNDSRFRT LRGSKNRFGA VNELGVFAMT EQGLKEVSNP SAIFLQRSDE VASGSVVMVV
WEGTRPLLVE IQGLVDMSSL GNPRRVAVGL EQNRLAMLLA VLHRHGGIMV GDQDVFVNVV
GGVKIVETSA DLALLLALVS SFRDQPLPRD LVVFGEVGLA GEIRPVPSGQ ERLREAAKHG
FKKAIVPANN VPREPIKGLE IVAVKKLSEA LEAI
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