Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0404 |
Symbol | |
ID | 3965980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 500303 |
End bp | 501799 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919467 |
Product | Signal transduction histidine kinase-like |
Protein accession | YP_525880 |
Protein GI | 90020053 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGTC GTTTTGCTAG GTTATGGCGC ACGTCGGTTG CGTTTAAATT AAGTACTCCC ATCGTGGTCG TTGGGGTAGT GCTTGTGGTG GTTATCTATT GGGTGGTGCG CAGCGAAGGT CGCGAGCTCA CACAAAAAAG TGCCGTGCGC TTAGCTAATT TACTGGTCGA CTCGATTGTG CTCGGGGCGC AAATTAACGG TAGCAATTCC AATGTTGTGC GCCTTGTTAA TGCTTTAGGG GTGTACCGCG AGCTGGAGTT TGTGGCGTTG ATTGATGAGC GCAGTCAAAC TATTTTGGCG GCATCTAAAA ATCGCTTAAT CAATTCCCCT CAATCGGCGC TCGCCGAATA CACCTTGGCC CTGCCGCTGC TGGCAAAAAT AGACCGGCTC GAAAATGTGT ATTTTATAGA GGAAGGTAGC CGCTACCATA TGGCTGCGCG CATTAAATTG TACGACCCCG CCACAGTGTC GCTGCGCGAT ATGACCATTA TTTTTGTTAT TAATGCGCAA AAGGCCAGCG GTGAATTGGC TAGCGCCCTA AACCTAACTA TCTGGGTTTT AATTATTTCA ATTTTGTCTA TGTTGTTTGC CTCTAGCTGG GTGCAGCAAC GGGTGTTGTT TCGGCGTTTA TCTAAATTCG AAAGTTTAAT TGCCAGCGAG GTAGAACAGC TAACCGGCAG TAAGCTTGTT AAACGCGACG GCGATGAAAT AGATGGCATT CAAGCCAATT TTTTAACCAT GCTGCAAGAA AAGCACGAAG CGGATGTAGA GCGTGAAATG GCGCTGGAAG CTGCAGAGGC TAGCAACCAA GCCAAAAGTG ATTTTCTGGC TAATATGTCC CACGAGTTGC GCACCCCGCT TAATTCAATT ATTGGTTTTT CTAAACGCAT TTTAAAAACG CAAGAAAATT TAGATGAGCG CCAAGTGCAT TCCCTTGGGG TAATCAGTCG CAGTGGGGAG CACCTGCTAC AGCTTATTAA CGATGTGCTC GATCTCACCA AAATTGATGC GGGGCGTATG GAAATTTCGC CGCGACCAAC GGATTTAACG CAAGTGTGCC GCTACGCCAT AGAAGACCAG CAAGAAGCCG CTCACAGCAA AGGCTTGCGT CTAACGCTGC ATGCCCCAGA AACTTTAGTG GGCGAAGTCG ATGAGCTGCG TATTCGCCAA GTAATGCTTA ACCTTGTGAG CAACGCCGTT AAATACAGTG AGCAGGGCGA AATTGTGGTG GCGTTGCGCT ATGTGGATGA TGCCATTGAA ATATGTGTAG AAGACAGTGG CATAGGCATA AAAGCAGAAG ATCAAAAACG GTTGTTTAAG CGCTTTGAGC AGTTCGATAT GCAAAGCCGT ATGCAAATAG GTCGCGGCTC GGGCTTGGGG CTATATATTG TGAACGAGTT TGTGCGCCTG CATAAAGGTT GGCTTAAAGT TGAATCGGAA TACGGTCGCG GCAGTCGCTT TTATGTGTAC TTGCCTAGCA AGGCCGTGGT TGAGTAA
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Protein sequence | MLSRFARLWR TSVAFKLSTP IVVVGVVLVV VIYWVVRSEG RELTQKSAVR LANLLVDSIV LGAQINGSNS NVVRLVNALG VYRELEFVAL IDERSQTILA ASKNRLINSP QSALAEYTLA LPLLAKIDRL ENVYFIEEGS RYHMAARIKL YDPATVSLRD MTIIFVINAQ KASGELASAL NLTIWVLIIS ILSMLFASSW VQQRVLFRRL SKFESLIASE VEQLTGSKLV KRDGDEIDGI QANFLTMLQE KHEADVEREM ALEAAEASNQ AKSDFLANMS HELRTPLNSI IGFSKRILKT QENLDERQVH SLGVISRSGE HLLQLINDVL DLTKIDAGRM EISPRPTDLT QVCRYAIEDQ QEAAHSKGLR LTLHAPETLV GEVDELRIRQ VMLNLVSNAV KYSEQGEIVV ALRYVDDAIE ICVEDSGIGI KAEDQKRLFK RFEQFDMQSR MQIGRGSGLG LYIVNEFVRL HKGWLKVESE YGRGSRFYVY LPSKAVVE
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