| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0401 |
|---|
| Symbol | |
|---|
| ID | 3967609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 497246 |
|---|
| End bp | 497776 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637919464 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525877 |
|---|
| Protein GI | 90020050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.68677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGCGC TGTTTCAGCT TAACTACCAC AACCAGTACT TTAAGGCTTT TTCTAACGAT
AAAGACCTAA ACTACATCAA GCGGTTATGG TTGGATTCGC TGTCGCGCTT TGAGCCAGAA
GTGCTGCTTA AAGCATCGCG CTCGGTTATT GAAAACAGTG AATTTTTGCC CACTCTAAAA
CGCATGATTC AAGCCTGTGA AGAAGCGGCC CAGCCAGATT TACCCGACGC GCACCAAGCG
TTTATTGAGG CCTGCCAAGC CCCTTCGCCC AAAGCCGGGT TTACTTGGTC GCACCCCATT
GTTTATCACG CGGGCAAAGC CAGCGATTGG TTCTTTTTAC AAAATAACCC CGAGCACATC
GCCTTCCCAG TATTTAAAGC TAATTTCAAT AAATTATGCG AACGCCTATT AAAGGGCGAA
GAATTGCCCG CCCCGCAAGT TAAGGCGTTA CCGGCCGAAA CGACCACCCC TCTAAACAAG
CAAGAAAACC AAGTGCGCCT TAAACAGCTG CGCGACACAT TAAAAATATA G
|
|---|
| Protein sequence | MFALFQLNYH NQYFKAFSND KDLNYIKRLW LDSLSRFEPE VLLKASRSVI ENSEFLPTLK
RMIQACEEAA QPDLPDAHQA FIEACQAPSP KAGFTWSHPI VYHAGKASDW FFLQNNPEHI
AFPVFKANFN KLCERLLKGE ELPAPQVKAL PAETTTPLNK QENQVRLKQL RDTLKI
|
|---|
| |