| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0392 |
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| Symbol | |
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| ID | 3967600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 489152 |
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| End bp | 490111 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919455 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_525868 |
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| Protein GI | 90020041 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0549299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAC CTAAAGACTT TCTAAGTGAC TTTCACTGGT TAATGGATGT TCTCCAGAAT
ATCGACGTGG GTCTTATTAT TTTAGACGAA GAGTTTAATA TCCAACTGTG GAACAGCTTT
ATGCAAAACC ACAGCGCCAT GGGGCCCGCC GACGTACTGG GCAAAAATAT CTTTGAATCC
TTCCCCGAGC TGCCCGAACC GTGGTTTAGG CAAAAAGTAC AATCGGTATT TGTGCTGCAT
AATTCCGCGT TCACCACATG GGAGCAGCGC CCGTACTTAT TTAAATTTAA AAATTATCGG
CCCGTTACCG GTATTGCCGA TTTTATGTAT CAAAACAGCA CCATTATTCC CCTAAAAGAT
ACCCGCGGCA AAGTCGAACA CATTTGCCTA ATTGTTTACG ACGTAACAGA AGTTGCCGTA
AACCGCTTGC AAATTCAAGC CGCCAACCTG CAATTGCACG AAATTAGCCG CACCGACGGT
CTAACAGGCT TACTCAACCG CAAAACGTGG GAACTGGACG CCGAGCAAGA GTACAAACGC
TTTAAGCGAC ACGAACACCC TTGTTCGTTA GTGATGTTCG ATATAGATCA CTTTAAAAAT
ATTAACGATA GCTATGGCCA CCCGGCAGGC GATGAAGTAA TACGGCAAAC TGCCGCCGCG
GTTAAATCGT GTATTCGCGA TATAGATATA GCAGGCCGCT ACGGCGGCGA AGAGTTTACG
ATTGTGCTTA GCGATACCGA TACTGAGGGT GCTCTTGTGG TTGCCGAGCG GATACGCAAT
CAAATTCAAG AGCTCACTGT GCACTATGAG GACTTCGCCA TTCAATTTAC GGTAAGCCTA
GGTGTTGCCC AGCTAACCCA GCAAATGACC AATCGCACAG CGTGGATAGA CTGCGCCGAT
AAGGCGCTTT ATCAAGCCAA AAAAAATGGC CGCAACAACT CTGTTGTTTA CACCCCCTAA
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| Protein sequence | MPAPKDFLSD FHWLMDVLQN IDVGLIILDE EFNIQLWNSF MQNHSAMGPA DVLGKNIFES
FPELPEPWFR QKVQSVFVLH NSAFTTWEQR PYLFKFKNYR PVTGIADFMY QNSTIIPLKD
TRGKVEHICL IVYDVTEVAV NRLQIQAANL QLHEISRTDG LTGLLNRKTW ELDAEQEYKR
FKRHEHPCSL VMFDIDHFKN INDSYGHPAG DEVIRQTAAA VKSCIRDIDI AGRYGGEEFT
IVLSDTDTEG ALVVAERIRN QIQELTVHYE DFAIQFTVSL GVAQLTQQMT NRTAWIDCAD
KALYQAKKNG RNNSVVYTP
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