| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0374 |
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| Symbol | |
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| ID | 3967621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 461012 |
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| End bp | 462907 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919437 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_525850 |
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| Protein GI | 90020023 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATT ATTCAGCAGA AGATATTGAA GTATTAACGG GCCTAGACCC CGTAAAAAAA
CGCCCCGGCA TGTACACCGA CACGGTGCGG CCCAACCACC TCGCGCAAGA AATTATTGAT
AACAGTGTGG ATGAAGCACT GGCGGGGCAC GCCAAAAAAA TTGAAGTAAT ACTGCATAAA
GATCAATCGG TAACCGTTAC CGACGATGGC CGCGGTATGC CAGTAGATTT ACACCCAGAG
CAAAAAAAGC CGGGGGTAGA AGTTATATTA TCTACCCTGC ATGCCGGTGG TAAATTCTCC
AACAAAAATT ACCAGTTCTC TGGTGGTTTG CACGGTGTGG GGGTGTCGGT TGTAAACGCC
CTTTCCGAAA GTTTAGAAGT AACTATTCGC CGCGATGGCC AAGTGTATCG CATGGGGTTT
AAAAACGGCG ATAAAGTTAG CGACCTAGAA GTAATAGATA CTTGCGGCAA GCGCAACACC
GGTACATCGG TGCGCTTTTT GCCCAACCCC AGCTATTTCG ATTCGCACAA ATTTTCTGTT
TCGCGTTTGC GTCACAACCT GCGTGCAAAA GCCGTACTGT GCCCCGGCCT AGAAGTTGTT
TTTACCGATG AGCAAACCGG CGACAAAGAT ACCTGGTACT ACGAAGACGG CTTAAAAGAT
TACCTAAGCC AAGCAACCGA AGGCTGGGAA ACACTGCCCG CCGATCCGTT TGTTGGCTCG
TTCACCGGTA CCACCGAAGC GGCCGACTGG GCTGTGCAAT GGCTGCCCGA AGGCGGCGAA
GTTACCCAAG AAAGTTACGT AAACTTAATT CCCACTGCGC AAGGTGGTAC GCACGTAAAT
GGTTTGCGTA CAGGCTTAAT GGAAGCCATG CGCGAATACT GCGAAATTCG CAACCTTGTG
CCGCGCGGTA TAAAAATTAC CCCCGACGAC GTGTGGATGA ACTGCTGCTT TGTGCTTTCA
TCTAAACTTG CCGACCCGCA ATTTTCTGGC CAAACCAAAG AGCGATTATC GTCTCGTGAA
GCGGCGGCAT TTGTATCGGG CGTAGCTAAA GACGCCTTCA GTTTGTGGTT AAACCAACAC
ACAGAAGAAG GCGATAAGCT CGCAGAATTC TGCATTAATA ATGCGCAAAA ACGCGTGCGC
TCTAGTAAAA AAGTTGCGCG CAAAAAAATC ACCGCAGGCC CAGCACTGCC TGGTAAATTG
GCCGATTGTT CATCCGACGA CCCAGCCAAC GGCGAATTAT TTCTGGTGGA AGGGGATTCG
GCAGGTGGCT CTGCCAAGCA AGCGCGCGAT CGCGATCACC AAGCCATCAT GCCGCTGCGC
GGAAAAATAT TAAATACCTG GGAAGTAGAA AGCCAAGAAG TTTTGGCTTC GCAAGAAGTG
CATGACATTT CGGTAGCGTT GGGTATAGAC CCAGGCTCAG ATAACCTAGA TGGGCTGCGC
TACCACAAAA TATGTATTCT TGCCGATGCG GATTCCGACG GCTTGCACAT TGCCACGTTG
TTATGCGCAT TGTTTTATCA ACACTTCCGC GCACTAGTCA GCGCCGGCCA CGTTTACGTA
GCTATGCCGC CTCTGTACCG CATAGATATA GGCCAAGATG TTTACTACGC GCTAGACGAT
AGCGAAAAAC AAGGGATTCT AGACCGCATA GTTGCCGAAA AGAAAAAAGG CAAAGTAAAC
GTACAGCGCT TTAAAGGTTT GGGTGAAATG AACCCACTAC AACTGCGCGA AACCACCATG
GCTCGCGACA CACGCCGCCT AGTGCAGCTA ACCATAGATG AAGAAGACGA AACAACTCAA
CTTATGGATA TGCTACTTGC CAAAAAACGC TCCGGCGACA GAAAAACGTG GCTAGAAGAT
AAAGGCGATT TGGCTGATAT TGGTAATGAT TTGTAA
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| Protein sequence | MANYSAEDIE VLTGLDPVKK RPGMYTDTVR PNHLAQEIID NSVDEALAGH AKKIEVILHK
DQSVTVTDDG RGMPVDLHPE QKKPGVEVIL STLHAGGKFS NKNYQFSGGL HGVGVSVVNA
LSESLEVTIR RDGQVYRMGF KNGDKVSDLE VIDTCGKRNT GTSVRFLPNP SYFDSHKFSV
SRLRHNLRAK AVLCPGLEVV FTDEQTGDKD TWYYEDGLKD YLSQATEGWE TLPADPFVGS
FTGTTEAADW AVQWLPEGGE VTQESYVNLI PTAQGGTHVN GLRTGLMEAM REYCEIRNLV
PRGIKITPDD VWMNCCFVLS SKLADPQFSG QTKERLSSRE AAAFVSGVAK DAFSLWLNQH
TEEGDKLAEF CINNAQKRVR SSKKVARKKI TAGPALPGKL ADCSSDDPAN GELFLVEGDS
AGGSAKQARD RDHQAIMPLR GKILNTWEVE SQEVLASQEV HDISVALGID PGSDNLDGLR
YHKICILADA DSDGLHIATL LCALFYQHFR ALVSAGHVYV AMPPLYRIDI GQDVYYALDD
SEKQGILDRI VAEKKKGKVN VQRFKGLGEM NPLQLRETTM ARDTRRLVQL TIDEEDETTQ
LMDMLLAKKR SGDRKTWLED KGDLADIGND L
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