| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0370 |
|---|
| Symbol | |
|---|
| ID | 3967617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 458219 |
|---|
| End bp | 458836 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637919433 |
|---|
| Product | ADP-ribose pyrophosphatase |
|---|
| Protein accession | YP_525846 |
|---|
| Protein GI | 90020019 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACT TGCCAGTTAC ACTTAATCGA GATGATGTAG ACGTGCTCGA TGAAAAAATT
GTTTGGAACG GTTTTTTCAA AATGCACAAA CTGACATTAA AACACCGTAA ATTCGATGGA
GAGTGGACGG GAGAGATTTC CCGTGAGCTG TTCCATCGCG GCGAAGCGTC GGCGGCGGTA
CTGTACGACC CCGAGCACGA TCTAATAGGC TTGGTGGAGC AGTTCCGTGT GGGTGCTATC
GATTCTTCCT TTGGCCCGTG GTGCCTAGAA GTGGTGGCGG GTATGTTAGA GGAGGGGGAA
ACCCCGGCAG AGCTAATCAA GCGCGAGCTA GAAGAAGAGG CTGGCGTAAC CGATGCGGAG
ATTATTCCCA TCACTACGTA TTACTCCACC CCCGGCGGCT GCAGCGAACT CATCCACCTG
TTTTGTGCCA CCTGTAACCT AAAGGGGCGC GGTGGCGTTT TTGGGCTAGA CGACGAAAAC
GAAGATATAT ATTTACACGT TTTGCCAGCC GACGAAGTAT TTGCTGGTAT GCTTAACAGT
AGAGCCAACA ACGCAGCCAC CCTAATAGGC TTGCAGTGGC TACAGCTTAA TAGGCAATCT
CTAATGGCTA AGCGCTAA
|
|---|
| Protein sequence | MEDLPVTLNR DDVDVLDEKI VWNGFFKMHK LTLKHRKFDG EWTGEISREL FHRGEASAAV
LYDPEHDLIG LVEQFRVGAI DSSFGPWCLE VVAGMLEEGE TPAELIKREL EEEAGVTDAE
IIPITTYYST PGGCSELIHL FCATCNLKGR GGVFGLDDEN EDIYLHVLPA DEVFAGMLNS
RANNAATLIG LQWLQLNRQS LMAKR
|
|---|
| |