| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0358 |
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| Symbol | |
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| ID | 3964824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 442112 |
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| End bp | 443956 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919421 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_525834 |
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| Protein GI | 90020007 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.920841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAT ATCGATCTAG AACCACCACC CAAGGCCGCA ATATGGCGGG TGCCCGCGCC
CTATGGCGTG CGACTGGAAT GAAAGACGAA GACTTTCAAA AACCCATTAT TGCCGTAGTT
AACTCCTTCA CCCAATTTGT GCCTGGTCAT GTTCACTTAA AAGACATGGG CCAGCTTGTT
GCGCGCGAAA TAGAAAAAGC GGGCGGCGTA GCGAAAGAGT TCAACACCAT TGCCGTTGAT
GACGGCATCG CCATGGGCCA CGACGGCATG CTCTACAGCT TGCCAAGCCG CGACATTATC
GCCGACTCGG TTGAATACAT GGTTAACGCC CACTGTGCCG ACGCCATGGT GTGTATATCG
AACTGCGACA AAATCACACC GGGAATGCTA ATGGCCGCAA TGCGCCTAAA TATACCTGTT
GTATTTGTAT CTGGCGGGCC AATGGAAGCC GGTAAAACCA AGTTGGCCGA GCACGGCTTA
GACTTGGTAG ACGCCATGGT TATTGCAGCC GATAGCAGCG CAAGCGACGA ATACGTGGCA
GAAATAGAGC GCAGTGCTTG CCCAACTTGT GGCTCTTGCT CTGGTATGTT CACCGCCAAT
TCGATGAACT GCCTAACTGA AGCGTTAGGG TTAAGCCTGC CAGGTAACGG TACTGTAGTT
GCGACCCATT CCGACCGCAG AGCTTTATTC GAGCGCGCAG GCCACCTTAT TGTTGACCTG
TGTAAAGATT ACTACGAGCG CGAAAACGCC AACGTTTTGC CACGTTCTAT TGGTAACAAA
GCCGCCTTCG AAAACGCCAT TACGCTCGAC ATCGCAATGG GTGGTTCTAC CAACACCATT
CTGCACTTGC TCGCCATTGC CCAAGAAGCG GAATTAGATT TCACCATGGA AGATATCGAC
CGCATTAGCC GCTACGTACC GCAGCTGTGT AAGGTTGCGC CAAACACGCA AAAATACCAT
ATAGAAGATG TTCACCGCGC AGGCGGCATT ATGTCTATTC TCGGCGAGCT AGCACGTGGC
AACCTACTAA ACGTAGACTG CCCAACCGTG CACTCACCCA CCATGGCCGA TGCAATCGCC
CAGTGGGATA TCACTCAAAC CGGCTCTGCA GAAGTTGCTG AATTTTATAA AGCTGGCCCT
GCAGGCATAC CAACCCAAAC CGCATTCAGC CAATCTACCC GCTGGCAGTC GCTAGATGGC
GATCGCGCTG ATGGCTGTAT CCGTTCTGTT GAGCACGCTT ATAGCAAAGA AGGCGGCCTA
GCCGTACTTA CCGGTAACAT CGCGGAACAA GGCTGTGTAG TTAAAACAGC AGGTGTAGAC
GAAAGTATAT TAGTGTTTGA AGGCACAGCC TACGTAACAG AATCGCAAGA TCAGGCCGTG
GCCGATATTC TTGCCGACAA AGTTACCGCA GGCTCTGTAG TTATTGTGCG CTACGAAGGC
CCCAAAGGCG GCCCAGGCAT GCAAGAAATG CTTTACCCAA CGTCTTACAT TAAGTCTAAA
GGCCTTGGTA AATCCTGTGC GCTACTTACA GATGGCCGCT TCTCTGGTGG TACCTCAGGT
TTATCTATTG GCCACGTATC GCCAGAAGCA GCAGCGGGCG GTGCAATTGG CTTAGTTAAA
ACAGGCGATA AAATTCTTAT CGACATCCCC AACCGCAGCA TCAACGTATT GCTAGAAGAT
GGCGAATTAG AAAAACGTCG AGCAGAGCAA GATGCTAAAG GCTGGAAACC CGAACTACCG
CGCCCGCGCA AAGTATCTAG CGCATTAAAA GCTTATGCCT TACTTGCTAC CAGCGCAGAT
AAAGGCGCAG TAAGAGACCT GAAAAAACTA GAGTCCTTAC AGTAG
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| Protein sequence | MPQYRSRTTT QGRNMAGARA LWRATGMKDE DFQKPIIAVV NSFTQFVPGH VHLKDMGQLV
AREIEKAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRDII ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPV VFVSGGPMEA GKTKLAEHGL DLVDAMVIAA DSSASDEYVA
EIERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGTVV ATHSDRRALF ERAGHLIVDL
CKDYYERENA NVLPRSIGNK AAFENAITLD IAMGGSTNTI LHLLAIAQEA ELDFTMEDID
RISRYVPQLC KVAPNTQKYH IEDVHRAGGI MSILGELARG NLLNVDCPTV HSPTMADAIA
QWDITQTGSA EVAEFYKAGP AGIPTQTAFS QSTRWQSLDG DRADGCIRSV EHAYSKEGGL
AVLTGNIAEQ GCVVKTAGVD ESILVFEGTA YVTESQDQAV ADILADKVTA GSVVIVRYEG
PKGGPGMQEM LYPTSYIKSK GLGKSCALLT DGRFSGGTSG LSIGHVSPEA AAGGAIGLVK
TGDKILIDIP NRSINVLLED GELEKRRAEQ DAKGWKPELP RPRKVSSALK AYALLATSAD
KGAVRDLKKL ESLQ
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