| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0356 |
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| Symbol | |
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| ID | 3964822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 439959 |
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| End bp | 440558 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919419 |
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| Product | periplasmic protein TonB |
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| Protein accession | YP_525832 |
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| Protein GI | 90020005 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0245094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.451591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTAG CAAGATTAAT TTCGTCTTTG ATTCCTGCAG TGGCCATTAC GGCTGGTCTA
TTGCTGTTAA TGCATTTTTT GATTAACGCG AATATCAAGG CACCGGAAGA AGGGGAGGCG
TTTAAAATCC CTGAAATTAC CATGCCTGAG CGGGAAATTG AGACCGAATA CGACACCAAG
AAGCCAGCTA AGCCAGACGA GCCAGAGCAA CCACCACCTG AGTTACCTGA GCCAGAGTTT
CAGGATGCTG ATATCGAAGC TACAGTGTCC ATTCAACCTA CGGTTAAAGC TAATTTAGAT
GTAGGCGGCA TTGGCGGTTT TGCTTCAGAC GGTGACTACT TACCTATCGT AAAAGTAGCG
GCTAAATACC CACAGCGTGC TGCTGCACGT GGTATTGAAG GCTACTGTAT TGTTATGTAC
ACCGTGACCA AAACTGGTGA AACGCGTGAC GTAGTGGTTG ATGATTGTCC AGAAAGTATC
TTTGCCCGCG AGTCCATCAA GGCGGCAGAA CGCTTTAAAT ACAAGCCGAA AGTGATTAAC
GGCGAGCCCG TAGAAGTTCC AAACGTGCGC AACCGCTTCA CCTTCGAAAT GGCTAAATAA
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| Protein sequence | MTLARLISSL IPAVAITAGL LLLMHFLINA NIKAPEEGEA FKIPEITMPE REIETEYDTK
KPAKPDEPEQ PPPELPEPEF QDADIEATVS IQPTVKANLD VGGIGGFASD GDYLPIVKVA
AKYPQRAAAR GIEGYCIVMY TVTKTGETRD VVVDDCPESI FARESIKAAE RFKYKPKVIN
GEPVEVPNVR NRFTFEMAK
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