Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0342 |
Symbol | |
ID | 3966523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 426038 |
End bp | 426454 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919405 |
Product | hypothetical protein |
Protein accession | YP_525818 |
Protein GI | 90019991 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000322969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.532005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC TCAAGCTTGC CACAGTATTA GGGCTCGTCA TTTTCAGTAT GGGTAGCTTG GCCGACATAG CCATTATCAC GCACCCTTCC AATACCAACC CGCTGGATCA AACCGCCATA AGTAAAATAT TTTTAGGCAA GGTTAAATCC TACCCCGACG GCGGAACCAT TATTGCCATT AACCAGCTCG AAGGCTCGCC CGTGCGCGCC GCCTTTGACG AGTCTGTACT GGGTAAATCG TCTTCTCAAA TAAAATCCTA CTGGTCCAAA CTTATGTTTA CCGGCAAGGG CACACCCCCA CAAGAAGTGC AGAGTGATGC CGAAGTAAAA CAATTGGTAG CCGCCAACCC AAGCATTATT GGCTATGTGG ACGCATCGCT GGTAGACGAC AGCGTTAAAG TGCTGCTTAA GTTTTAA
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Protein sequence | MKLLKLATVL GLVIFSMGSL ADIAIITHPS NTNPLDQTAI SKIFLGKVKS YPDGGTIIAI NQLEGSPVRA AFDESVLGKS SSQIKSYWSK LMFTGKGTPP QEVQSDAEVK QLVAANPSII GYVDASLVDD SVKVLLKF
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