Gene Sde_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0342 
Symbol 
ID3966523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp426038 
End bp426454 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID637919405 
Producthypothetical protein 
Protein accessionYP_525818 
Protein GI90019991 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000322969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.532005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC TCAAGCTTGC CACAGTATTA GGGCTCGTCA TTTTCAGTAT GGGTAGCTTG 
GCCGACATAG CCATTATCAC GCACCCTTCC AATACCAACC CGCTGGATCA AACCGCCATA
AGTAAAATAT TTTTAGGCAA GGTTAAATCC TACCCCGACG GCGGAACCAT TATTGCCATT
AACCAGCTCG AAGGCTCGCC CGTGCGCGCC GCCTTTGACG AGTCTGTACT GGGTAAATCG
TCTTCTCAAA TAAAATCCTA CTGGTCCAAA CTTATGTTTA CCGGCAAGGG CACACCCCCA
CAAGAAGTGC AGAGTGATGC CGAAGTAAAA CAATTGGTAG CCGCCAACCC AAGCATTATT
GGCTATGTGG ACGCATCGCT GGTAGACGAC AGCGTTAAAG TGCTGCTTAA GTTTTAA
 
Protein sequence
MKLLKLATVL GLVIFSMGSL ADIAIITHPS NTNPLDQTAI SKIFLGKVKS YPDGGTIIAI 
NQLEGSPVRA AFDESVLGKS SSQIKSYWSK LMFTGKGTPP QEVQSDAEVK QLVAANPSII
GYVDASLVDD SVKVLLKF