Gene Sde_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0341 
Symbol 
ID3966522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp424592 
End bp425788 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID637919404 
Producttopoisomerase IV, subunit B 
Protein accessionYP_525817 
Protein GI90019990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000001862 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.195257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTA GGAAGAAACT CTTTTTTGCG TGCGGCATAG GCTTAGCAGC TGCATCGGCC 
CAAGCGGAAG TGACCTTTAA CGGGTTTGCG ACATTGGCTG GGGGGGTTGC AAGCATAGAC
GATGAACCAG GCCTTGATCT GAGTGCAGAT CCATTTTCAA GCCAGCCTAG CCGTTTATTT
GGGTACGACG ATCAGCTCGA CTATGAAAAC AACTCATTAC TCGCGCTGCA GGCATCTTCA
GATTTAGGTG ACGGCTTAAG TGCAACCGCT CAGGTTATTG CTCGCGGCTC AGACCAGTGG
AATGCAAAAT TAGCTTGGGC TTACATCGGT TATGAAATTA ACGACAACGT TAAACTTATA
GCCGGCCGTC AACGTATGCC ATTCTACGTA TTCTCAGATT ACCTAGATGT GAGCTACGCC
TACCACTGGA TTACCCCACC AGAAGGCGCA TACAGCCTAC CATTTGATTC AACAAATGGT
ATTGGTGCAA TTATTACTCA CCAGCTCGGT AGCGCCGACT CCACATTACA CTTTGTAACT
GGTCGCATTA AAGAAGACTT ACAACTCGAC CGACCTCGCG ACGCAGACCT ATCCGACATG
TACAGCGCAG CTTGGACACT TAACTTTTCA GACTTTTCTT TGCGTGCTGG CTACGCAAGT
GCAAACCTGC AGTACAGCGT ACCAGAGCTA GAGCCACTAG TAGCAAACTG GCAAACTGCC
GTTGGTCAAG ATTTTAGCGA ACAAATTCTT GCCAGCGACG AAGATAACAA GGGTAGTTTC
GTTGGCTTTG GTGCAACTTA CGATAATGGT AATTGGCTCG CCATTACTGA ATACACCGAA
ATTACGGTAG AGGGCACCAA CCTGCCTGCC AAACAAACAT CCTATTACTT CTCTTTAGGT
AAGCGCTTTG GCGATGTAAC TCCGCATATA ACTTACGGTG TAGACGAAAA CGAAGCTTCA
AGCACAAGCT TTATCGACCC ATATCGCAGT AATGCAGGTC TTGCTGAGTT AATTTTCACT
ACAGATGGTG TATTCAACAA CAAAGATTTA ATCGTCGATA ACGACTATGT TACTGCTGGT
ATTCGCTGGG ATTTCCACTC ATCGGCAGCT TTTAAAGTTG AGTACACAGT GCACAACGCC
AATCACTACG AACGTACTGA CAGCCTACTC CGCTTCGCAA TCAGCACCGT ATTCTAA
 
Protein sequence
MNTRKKLFFA CGIGLAAASA QAEVTFNGFA TLAGGVASID DEPGLDLSAD PFSSQPSRLF 
GYDDQLDYEN NSLLALQASS DLGDGLSATA QVIARGSDQW NAKLAWAYIG YEINDNVKLI
AGRQRMPFYV FSDYLDVSYA YHWITPPEGA YSLPFDSTNG IGAIITHQLG SADSTLHFVT
GRIKEDLQLD RPRDADLSDM YSAAWTLNFS DFSLRAGYAS ANLQYSVPEL EPLVANWQTA
VGQDFSEQIL ASDEDNKGSF VGFGATYDNG NWLAITEYTE ITVEGTNLPA KQTSYYFSLG
KRFGDVTPHI TYGVDENEAS STSFIDPYRS NAGLAELIFT TDGVFNNKDL IVDNDYVTAG
IRWDFHSSAA FKVEYTVHNA NHYERTDSLL RFAISTVF