Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0341 |
Symbol | |
ID | 3966522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 424592 |
End bp | 425788 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919404 |
Product | topoisomerase IV, subunit B |
Protein accession | YP_525817 |
Protein GI | 90019990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000001862 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.195257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTA GGAAGAAACT CTTTTTTGCG TGCGGCATAG GCTTAGCAGC TGCATCGGCC CAAGCGGAAG TGACCTTTAA CGGGTTTGCG ACATTGGCTG GGGGGGTTGC AAGCATAGAC GATGAACCAG GCCTTGATCT GAGTGCAGAT CCATTTTCAA GCCAGCCTAG CCGTTTATTT GGGTACGACG ATCAGCTCGA CTATGAAAAC AACTCATTAC TCGCGCTGCA GGCATCTTCA GATTTAGGTG ACGGCTTAAG TGCAACCGCT CAGGTTATTG CTCGCGGCTC AGACCAGTGG AATGCAAAAT TAGCTTGGGC TTACATCGGT TATGAAATTA ACGACAACGT TAAACTTATA GCCGGCCGTC AACGTATGCC ATTCTACGTA TTCTCAGATT ACCTAGATGT GAGCTACGCC TACCACTGGA TTACCCCACC AGAAGGCGCA TACAGCCTAC CATTTGATTC AACAAATGGT ATTGGTGCAA TTATTACTCA CCAGCTCGGT AGCGCCGACT CCACATTACA CTTTGTAACT GGTCGCATTA AAGAAGACTT ACAACTCGAC CGACCTCGCG ACGCAGACCT ATCCGACATG TACAGCGCAG CTTGGACACT TAACTTTTCA GACTTTTCTT TGCGTGCTGG CTACGCAAGT GCAAACCTGC AGTACAGCGT ACCAGAGCTA GAGCCACTAG TAGCAAACTG GCAAACTGCC GTTGGTCAAG ATTTTAGCGA ACAAATTCTT GCCAGCGACG AAGATAACAA GGGTAGTTTC GTTGGCTTTG GTGCAACTTA CGATAATGGT AATTGGCTCG CCATTACTGA ATACACCGAA ATTACGGTAG AGGGCACCAA CCTGCCTGCC AAACAAACAT CCTATTACTT CTCTTTAGGT AAGCGCTTTG GCGATGTAAC TCCGCATATA ACTTACGGTG TAGACGAAAA CGAAGCTTCA AGCACAAGCT TTATCGACCC ATATCGCAGT AATGCAGGTC TTGCTGAGTT AATTTTCACT ACAGATGGTG TATTCAACAA CAAAGATTTA ATCGTCGATA ACGACTATGT TACTGCTGGT ATTCGCTGGG ATTTCCACTC ATCGGCAGCT TTTAAAGTTG AGTACACAGT GCACAACGCC AATCACTACG AACGTACTGA CAGCCTACTC CGCTTCGCAA TCAGCACCGT ATTCTAA
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Protein sequence | MNTRKKLFFA CGIGLAAASA QAEVTFNGFA TLAGGVASID DEPGLDLSAD PFSSQPSRLF GYDDQLDYEN NSLLALQASS DLGDGLSATA QVIARGSDQW NAKLAWAYIG YEINDNVKLI AGRQRMPFYV FSDYLDVSYA YHWITPPEGA YSLPFDSTNG IGAIITHQLG SADSTLHFVT GRIKEDLQLD RPRDADLSDM YSAAWTLNFS DFSLRAGYAS ANLQYSVPEL EPLVANWQTA VGQDFSEQIL ASDEDNKGSF VGFGATYDNG NWLAITEYTE ITVEGTNLPA KQTSYYFSLG KRFGDVTPHI TYGVDENEAS STSFIDPYRS NAGLAELIFT TDGVFNNKDL IVDNDYVTAG IRWDFHSSAA FKVEYTVHNA NHYERTDSLL RFAISTVF
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