Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0340 |
Symbol | |
ID | 3966521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 424155 |
End bp | 424580 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919403 |
Product | hypothetical protein |
Protein accession | YP_525816 |
Protein GI | 90019989 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000466882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.179324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATTA AACACTTAAT CGGCATGACT ATCTTCCTCG CTGGCACCTT GTTTAGCGTG CAAAGCTTGG CGGATATCGC AATTATCGTT CACCCATCCA ATGGCGCCGC ACTAGACGCA GATGAAGTGA GCCGTATCTT TTTGGGTAAA GCAAAATCCT TCCCTGGTGG CGCTACCGCA GTGCCAGTAA ACCAAGCAGA AGGCTCTATT GTGCGCACCG CTTTCGACGA TGGCATTATC GGCAAATCGG CTAGCCAGCT TAAATCCTAC TGGTCCAAAC TGGTATTTAC CGGCAAGGGT ACACCCCCAC AGGAAGTAAG CAGCGAAGAC GAAATTAAAA AGCTAGTTGC CTCTAACCCC AATATGATTG GCTACATAGA TGCAGCCAAC GTGGATAGCT CGGTGAAAGT TGCATTAACT TTCTAA
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Protein sequence | MRIKHLIGMT IFLAGTLFSV QSLADIAIIV HPSNGAALDA DEVSRIFLGK AKSFPGGATA VPVNQAEGSI VRTAFDDGII GKSASQLKSY WSKLVFTGKG TPPQEVSSED EIKKLVASNP NMIGYIDAAN VDSSVKVALT F
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