| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0338 |
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| Symbol | gcvT |
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| ID | 3966519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 422315 |
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| End bp | 423406 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637919401 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_525814 |
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| Protein GI | 90019987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0368876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.123109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAATG AAACAGTTTT AGCGCCACTA CACCGCGAAA TTGGTGGCAA GATGGTCGAT
TTTGGTGGCT GGGATATGCC ATTGCATTAC GGGTCGCAGG TTGAAGAGCA TCAAAAAGTG
CGTACCGATG CCGGTATGTT TGATGTTTCT CACATGACTG TAGTGGATGT GACCGGCGCT
GGTGCTAAGA CGTTTTTACA GTATGTGTTG GCTAACGATG TGGCCAAGCT TACCAAGAAT
GGTAAGGCGT TGTATTCGGG CATGCTTAAC CATGAGGGTG GCGTGGTTGA TGATTTGATT
GTGTACCTTA TGGAGTGGGG GTACCGCGTT GTAGTGAACT GCGCTACCCG CGAAAAAGAT
TTAGCCTGGA TGGTCGAGCA CGCAAAAGGG TTTGAGGTTG CGCTAAACGA GCGCGACGAT
TTGGCGATGA TTGCGGTGCA AGGCCCTGCT GCACGCGAGA AAACGGCGCA AATTTTGCCC
GAATTGTTAA CTATGGATTT AGATATATTC CAAGGCGCCG ATGTAGCCGC GCTGGGCGAT
GTAACTTTTT TTGTGGCGCG CACTGGTTAC ACCGGTGAAG ACGGTTACGA AATTATGCTG
CCCACTAGCG ATGCCGATGC GTTTTGGCGT GCGCTTATGG CGGTGGGTGT AGCGCCTTGC
GGTTTGGGTG CGCGCGATAC ATTGCGTTTA GAGGCGGGTA TGAATTTGTA CGGCCACGAG
ATGGACGATA ACACCTCGCC GCTGGTGGCC AATATGGCGT GGACGATTGC TTGGCAGCCA
GAAGAGCGCA ATTTTATTGG TCGCGAGGCG ATTAGCGCCG AGAAAGCGGC GGGCGTTACC
CATAAGTTGG TGGGCCTAGT GTTGCAAGAT CGCGGTGTGC TGCGCGCAGA GCAGGTTGTA
ACCTGTGAAG GCGTAGAGGG CGAGGGTGTA ATTACCAGCG GTACTTTTTC GCCTACATTA
AGTAAATCTG TGGCGCTTGC GCGCGTACCG GTGGCTTTTA GCGGTGAGTG CACAGTGGCT
GTGCGCAATA AGCAGTTAAA AGCGTTGGTG GTTAAGCCTA GTTTTGTGCG TTTGGGTAAG
GCTTTGGTTT AA
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| Protein sequence | MLNETVLAPL HREIGGKMVD FGGWDMPLHY GSQVEEHQKV RTDAGMFDVS HMTVVDVTGA
GAKTFLQYVL ANDVAKLTKN GKALYSGMLN HEGGVVDDLI VYLMEWGYRV VVNCATREKD
LAWMVEHAKG FEVALNERDD LAMIAVQGPA AREKTAQILP ELLTMDLDIF QGADVAALGD
VTFFVARTGY TGEDGYEIML PTSDADAFWR ALMAVGVAPC GLGARDTLRL EAGMNLYGHE
MDDNTSPLVA NMAWTIAWQP EERNFIGREA ISAEKAAGVT HKLVGLVLQD RGVLRAEQVV
TCEGVEGEGV ITSGTFSPTL SKSVALARVP VAFSGECTVA VRNKQLKALV VKPSFVRLGK
ALV
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