| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0335 |
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| Symbol | |
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| ID | 3966515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 418552 |
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| End bp | 419952 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919397 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_525811 |
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| Protein GI | 90019984 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4104] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.135685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA AACCTGCCGC TCGCTTAGGG GATATCGACA CAGGTCACCC ACCCTCGCCC
CCAACACCGG TCATTACCGG TAGCGCTAAC GTATTAATTA ATAGTCGCCC TGCAGCAAGA
AAAGGCGACA TGCTCGCGCC TCATCACCCC GGTATCCGCA CTATTACCTC TGGCAGCTCT
ACGGTAACCA TTAACGGCAA AAATGCAGCG CGTGTTGGCG ATAGCGTAAA CTGCGGCGGC
CGTTTACTTA TGGGTTCACC CACCGTATTT ATTGGCAACG GCTCGGGCAG CGGCAGTGGT
AACGTTATAA TTAGCGAAGC CGAACACAAC GAGAAGTGGC AAATTTTTGA AGACAGCTTT
AATAATTTAG ATGCTCCACA ACTATCAGAC TACGAACGCC AAGTAATGGA AGCTGACATA
GCCGTAAAAT ATCGCGGCGA GGCGGGTGGC ATACACGCAT GGCAAGAATA TTTCACCAGC
AATAACGAAG CAGTACCGTC ACCCAATGCG GGCCAGTCAG AAAAACTCGG CCACACGCTA
GCCGAAAAAT TACGGAAACA AGAAGCACTC GAAGACGCCG CATCAACGCG CTACCAAAAA
GCTTGGCTAC TCGATTACGC GCGCAGCAAC GATGACGAAA TATTAGCGAA ACACAGCGAA
TTTATAGACG AACAAATAGA CGACCCGCAA ACTACTTTAG AACAATTAGC ACAAGCACGC
GCAGCAGAAA ACAAAACAGC AAATAAAGTA TTGGGGAACA TGCCGCTAGA TGAACAAACA
GTTATAAAAG CGAAAATGGA TGCAGCCGCA AAGCAAGCAC ATGAAACCCA CCGCAACGGT
ACCGACGGCA CAACCAAACC AGTACTACAC GTAAACGCTG GCCAAAAATC GACTAAGAAA
GGCCAAAAAG GAACGTGGAA CCCAGAGCTC GAAAAACTAC AACCCAACAC AATATACGAC
GTAACCGTAG TACATGACGG CCAACCCGTT GTATATAGTT ACGAAACCGA CCACCTTAGC
CGAGTAGTGC GCGTGCAAGG CTCGTTAGCG CTTTCTATTG CAAAAACACC AAAAGACCGC
GACAAAAACC ACCGCAACCC AAGAACCCAA CGAAAATACG GCGGCCCTGT AAAAGAATAC
GATGGCGGGC ATTTAATTGC CACGCTATTT CAAGGGCCTG CGGAGAAGGT TAATTTGGTG
CCGCAATTGG CGGAGCAGAA TAGGCATGGC GATTGGCGAG CAATGGAGCG AAACTGGGCA
CATAAACTTA GCCAAAACAA ATCAATCGAT GTAGAAATTC AAATTTCCTA CAATGATGAC
AGTCAAACAC CTTCAATGAT CAAAACCTTA TCCAAAATAG ACGGAAAAAA TATGCGCCCG
CTAAAATTCG AGAACAAGTA A
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| Protein sequence | MAAKPAARLG DIDTGHPPSP PTPVITGSAN VLINSRPAAR KGDMLAPHHP GIRTITSGSS
TVTINGKNAA RVGDSVNCGG RLLMGSPTVF IGNGSGSGSG NVIISEAEHN EKWQIFEDSF
NNLDAPQLSD YERQVMEADI AVKYRGEAGG IHAWQEYFTS NNEAVPSPNA GQSEKLGHTL
AEKLRKQEAL EDAASTRYQK AWLLDYARSN DDEILAKHSE FIDEQIDDPQ TTLEQLAQAR
AAENKTANKV LGNMPLDEQT VIKAKMDAAA KQAHETHRNG TDGTTKPVLH VNAGQKSTKK
GQKGTWNPEL EKLQPNTIYD VTVVHDGQPV VYSYETDHLS RVVRVQGSLA LSIAKTPKDR
DKNHRNPRTQ RKYGGPVKEY DGGHLIATLF QGPAEKVNLV PQLAEQNRHG DWRAMERNWA
HKLSQNKSID VEIQISYNDD SQTPSMIKTL SKIDGKNMRP LKFENK
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