| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0326 |
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| Symbol | |
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| ID | 3966506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 406295 |
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| End bp | 407647 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919388 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525802 |
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| Protein GI | 90019975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.159286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.343021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTA AAAAGTTTAG CCTGCAATTA TCCATTCGGC TTGGTGCTAT TTTAGCGCTG
TTTATTGTTA TTGCTTTCGT CTTACAACAG CAGGGTTATT TTGCCGTTAC TACCCTGCTA
ATTGGCATCG CTATTATGCA ATGTGTTGCC CTTTTTAAAT ACACTAATAA AACTAATTTG
GAAATAGCTC GGTTTTTAGA TGCGCTTAAG TACGCCGACT TTTCGCAGCA TTTTAATTTT
GCACATACCG GTAATGGGTT TGAGGAGTTA GGCAATAGCA TTGAGGCGGT ATTACAAAAG
CAGCAACAGA TTGCCCTACA CAAGGAAGCA AAATACCGGC AATTAGCCGC CTTAGTAGAG
CAAGTACCGG TACCGTTGAT TAGCCTACAC GAAGATAACC GCGTAACACT TTGGAATAGC
AAGGCACGTA AGTTACTAGG TATTTTATGC TGTGAAAATA CCGATGATTT AAACCAATTA
GGCGAAAACT TTGCTGCGCA ATTAACTGCC ATACCTAACG GCGGTACCCG ACTAATTAAA
ATAGCTAGCG ATGGTATGGA ACAACAACTT ATGGTTACCG CCAGCGATTT AATTGTAGAG
GGCAAGCAAG AAAGGTTAAT AAGCCTACAG AATATTCAAT CGGAACTCGA TGCCGCCCAG
CTGCAGGCGT GGCAAGATTT AGTGCGTGTG CTTACACACG AAATAATGAA TAGCATTACG
CCTATTGCAT CGCTTGCCAA AACGGCAGAT GAATTAATAC ACGATGTAAA AACCAATTAC
GCCAATAGTA GTGAATTAGC CGAAGAGCTA GATGATATTG CCAGCGCCGT GCATACGGTA
GCTAAACGCA GTGATGGCCT AACGCAATTT GTAAACAGCT ATCGTAAACT TACCCGCTTG
CCTGCACCTA ATCGCTCAAC GTTTTTGGTA AGCGACTTTA TTGAACATAT ACGTAGTTTG
GTAAGCCAAG ATTTAGCCCA ACAAGGTATT CAGTTAGTAA CATCTGTTAA CCCAGCCCAA
CTACAACTGT TTGCAGATAA AGAAATGCTA ACCCAAGTAT TTATTAACCT AATTAAAAAC
GCCGAACAAG CCTTACACAA TACGCCAAAC CCAACCATAG AGATAAGCGC CGGCCTTAAC
TCGCGCGACC ATACAACCAT TAAAATATCA GACAACGGCA GCGGCTTAGC GACGGATTTA
ATAGAACAAA TTTTTGTTCC ATTTTTTACC ACTAAAAAGG AAGGGTCTGG TGTGGGCTTA
GCACTTACCC GCCAAGCAAT GATATTACAC GGTGGCGCAG TAAAGGCAGA GAACGCAAAA
ACAGGTGGAG CAATATTTAC GCTTATTTTT TAA
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| Protein sequence | MAFKKFSLQL SIRLGAILAL FIVIAFVLQQ QGYFAVTTLL IGIAIMQCVA LFKYTNKTNL
EIARFLDALK YADFSQHFNF AHTGNGFEEL GNSIEAVLQK QQQIALHKEA KYRQLAALVE
QVPVPLISLH EDNRVTLWNS KARKLLGILC CENTDDLNQL GENFAAQLTA IPNGGTRLIK
IASDGMEQQL MVTASDLIVE GKQERLISLQ NIQSELDAAQ LQAWQDLVRV LTHEIMNSIT
PIASLAKTAD ELIHDVKTNY ANSSELAEEL DDIASAVHTV AKRSDGLTQF VNSYRKLTRL
PAPNRSTFLV SDFIEHIRSL VSQDLAQQGI QLVTSVNPAQ LQLFADKEML TQVFINLIKN
AEQALHNTPN PTIEISAGLN SRDHTTIKIS DNGSGLATDL IEQIFVPFFT TKKEGSGVGL
ALTRQAMILH GGAVKAENAK TGGAIFTLIF
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