| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0311 |
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| Symbol | |
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| ID | 3968579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 384631 |
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| End bp | 385155 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919373 |
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| Product | hypothetical protein |
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| Protein accession | YP_525787 |
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| Protein GI | 90019960 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0312462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAGAGA ATCAACAGGC CCCCGAGCAG CGCATTGGGC GCGGTATGCT AATGATTGGC
TGGGTATTAG CCATAGTAGT GGCCACCTTG CTTATTCAGC GCTGGCAAGA TAAGCGCCAT
AACCCCAATG CTATGCCCGA GTCTAGTTCG GCAAATGGGG TGAATCAGGT TGTATTACAG
CGCAACCCGC AGCACCATTA CTTAACCGAC GGTACTATTA ATAATAAACC AGTAACGTTT
TTGCTCGATA CTGGCGCTAC CGATGTGGCT ATTCCAAGCG CCCTAGCGAA AAAGCTTGGC
CTTAAACGCG GTGCAAAAGG GGCGGCACAT ACGGCAAATG GTGTAACAAC AACTTACCGT
ACTAATATTG ATGTATTAAA GCTGGGTAGT ATTACGCTAT ACGATGTAGA CGCGAGCATA
ACTATGGGCT TTACCGGCGA TGAAATTCTT TTAGGTATGA GCGCCCTTAA AAGTGTCGAG
TTTACCCATC GCAATGGCAC GTTGGTGTTA AAGCAGTATT ACTAA
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| Protein sequence | MEENQQAPEQ RIGRGMLMIG WVLAIVVATL LIQRWQDKRH NPNAMPESSS ANGVNQVVLQ
RNPQHHYLTD GTINNKPVTF LLDTGATDVA IPSALAKKLG LKRGAKGAAH TANGVTTTYR
TNIDVLKLGS ITLYDVDASI TMGFTGDEIL LGMSALKSVE FTHRNGTLVL KQYY
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