| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0292 |
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| Symbol | |
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| ID | 3965431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 362987 |
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| End bp | 363718 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919354 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_525768 |
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| Protein GI | 90019941 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.640514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000719162 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTATTG ATATTAACGG CAAAATTGCA CTTGTTACCG GCGCTAACCG AGGCATTGGT
AAAGCCATTG TCGATTCACT AATAGAGCAT GGCGCCAGCA AGGTTTATTT GGCCGTGCGC
AACCCCGAGT CTACCGTTGA ACTGGCAAAA CAATACGGCG ATAAAGTGGT AACACTGCAG
GCAAACGTTG GCGACGACGC ATCGATTAGC GCATTGGCTC AAGCGGCGAA AGATGTAAAT
ATTGTGATAA ACAACGCCGG CGTAGTGCAG CCAGCCGACT TACTTAGCGC AGACGCCTTT
GCGGCACTTA AGCACGAGCT AAACGTTAAC ACCTACGGTT TATTGCGCGT TGCGCAGGCT
TTTGCACCGG TATTACAACA AAACGGGGGC GGCGCATTTG TGCAGCTTAA TTCGGTTGCC
TCTATTAAAA ACTTCACGCC CTTTACCACC TACAGCGCCT CTAAAGCCGC AACTTACTCC
ATTACACAAG GCCTTAAAGA TGTAATGGCT CCACTGGGCA TTGCTGTACT AAGCGTACAC
CCTGGCCCCA TTGCTACCGA CATGGGTGAT CAAGTGGGCA TGACAGAAGT TGCAGAACCT
GCGAATGTGG TGGCAGAAGG TATAGTTAGC GCGCTTAAAG CTGGCGACTT TCATTTGTTT
CCAGACACCA TGGCCAAACA ATTTGGCGAT GCCTATGATA GTTATGCGCA GGCAATTATT
AACGGCCAGT AA
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| Protein sequence | MSIDINGKIA LVTGANRGIG KAIVDSLIEH GASKVYLAVR NPESTVELAK QYGDKVVTLQ
ANVGDDASIS ALAQAAKDVN IVINNAGVVQ PADLLSADAF AALKHELNVN TYGLLRVAQA
FAPVLQQNGG GAFVQLNSVA SIKNFTPFTT YSASKAATYS ITQGLKDVMA PLGIAVLSVH
PGPIATDMGD QVGMTEVAEP ANVVAEGIVS ALKAGDFHLF PDTMAKQFGD AYDSYAQAII
NGQ
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