| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0287 |
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| Symbol | |
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| ID | 3965426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 357495 |
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| End bp | 359639 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919349 |
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| Product | Outer membrane receptor proteins mostly Fe transport-like |
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| Protein accession | YP_525763 |
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| Protein GI | 90019936 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000460019 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000346512 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGTGTGA AAAATGCATT ATTAAGCACC GCTGCGGCAA CTGTAAAAGG GGCGACCGCA
ACAATAGGAG CCGGTGCGTG GCTTTGTGTG GCGGGTGTAG CTATTGCGCA AGAGCCAAAC
GAAACTGAGG CAAAAAGCGC AGATAAAGGC GAAATAGAAA CCGTATTGGT AATGGGCAAG
CGCCAAGGCA GCTACACCAT TATTACCGAA GATACGCTCA AGCTAGTAAA AATGCCAGGC
GCCTTAGGCG ATCCACTAGG GGCAATAACT GCATTACCTG GGGTAATAAC ACCTGCGGCA
GGTGGCGAGC CCGCAGTGCG CGGCTCGTCG CCCAGCGATA ACCGTTACTT TGTTGATGGC
ATGCCCGCGG GTTATATCTT TCACGAATTC AATACGTCGA TTATTGACGA AAATATTATT
CAAGATTTTC AACTCTACCC AGCAGGGTTT AGCGCACAGT ATGCCAACGC AACCGGTGCC
GTGTTTGATA TACGTTTGCG CGACCCAGTA CAGCAGGATT TTACCACTAC GCTTACCGCC
TCTATGTTGC GCTCGGGCGT ATTGTTTGAA AGTGCGCTTA GTGAAAACAG CGCGTTTTAT
CTTTCTGCTC GCCACGGCAT GTTACCGCTA TTTTTACCCG AAGAAGATAC GCCCGATGAC
GACGGTATTC GCATAATATC TGCGCCTACC GATAGCGATT ATGTGTCTAA ATTTTTGTGG
TCTAACAGCG AAAAAAACAG GCTATCGGTA AACTTTATGG GGGCTACCGA TAAGGGCAAA
GCTGAATTTT CTGAGCTGTC TGATATGGTG GCAGAAAACC CAGACTTTGC CGGCGAAGCA
GAAATACAAG ATAAGTTCGA TAGCCAAAGC GTGGTGTGGG ATTACCAGCT AGCTTCGGGC
GCAGAGCTGC ACATACTTGC CGCGCATTAT AAAGATGAAG AAAATTTACA TTGGGGCGAT
AACTATTTTC AAAATATAGA AACCGAAAAC GCGCTGCTAA AAACCAATGT TGCATTTGCT
GTTGCTGCCA ACCATATAAT TAATATTGGC GCCGAAGTTG ATAATATGGA TTACGCTTTT
AAGGTACGTC AGCCGCTATT TACCTGCACT GAATTTGATG CAGACTGCCA AGCCAATCGC
CGCGATGTTA TCGATGTAAC CCTGCCGCTT ACGGTTAAGC AACAATCGCT TTTCGCTATA
GATCAATGGC AAGCCACAGA CGCGTTACAA TTAGAGCTGG GGTTACAGTG GCACGCAAAT
GATCAAACGG ATCAAACATT TATTCATCCT CGCGGTTCAT TTGCTTTAGC GGTTAGTGAA
CGTGTTACAT TAAAAGGCAG TGCGGGCAGC TATAATCGCT TGCCGGATGT ACAATATTCC
ATGCCCGAAC TCGGTAACCC TAAGTTACAA TCGTATCAAT CTAAGCACTA TAGCCTTGGA
TTGGAAGGAA AGGGATTAGA AGGGAAGGGT TTGGAAGGAA AGGGTTTAAT TGGCAGAGCA
CTAAGCGATT GGAACTGGAG CCTAGAGCTT TACCATAAAA CATTTAGCGA GTTACCGCGC
ACATTAGCCG CCGACGAACC CAATGCAGAG GATATTTATG CCAATGGTAC AGAGGGTGAA
GCTCGTGGTA TTGATATTTT TATTAACAAA AACTTCTCCA ATCGCTGGTA TGGTTGGGTT
GCACTAAGTT ATTCCGAAAG CACGCGCACC AATACAGCAA CAGATCAAAC GCTAGATTAC
ACATTAGACA CACCACTGGT ATTGAATGTT GTAGGTAACT ATCAGTTAAC GCACAATTGG
AATATTGGGT TTAGGTATAC CGCAAAAAGT GGTGAAGCCA ACACGCAAAT AGTAGGGGTA
AAACAAAATC CTAATTTTGC AGGCCACTAC TTACCTGTTT ACGGCGAGCC ATTTGCAGAT
AGGCTGCCCA TGCAGTCGCG TTTAGATTTT CGCGCAGAGC GGCCCATAAC GGTATTTGGT
AAAGAGGGTG TATTTTTTGT TGATGTCATT AACTTGCTCA ATCGCAAGAA TGTATCAGAA
ATTGTACTCG ACCACGAAAA AGTAAAAGAA ACTGGCGAAC TGCATCTGGT TAAAAATGTA
GATATGGAGA TATTCCCATC TATAGGTATG TCGCTTTCGT TTTAA
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| Protein sequence | MCVKNALLST AAATVKGATA TIGAGAWLCV AGVAIAQEPN ETEAKSADKG EIETVLVMGK
RQGSYTIITE DTLKLVKMPG ALGDPLGAIT ALPGVITPAA GGEPAVRGSS PSDNRYFVDG
MPAGYIFHEF NTSIIDENII QDFQLYPAGF SAQYANATGA VFDIRLRDPV QQDFTTTLTA
SMLRSGVLFE SALSENSAFY LSARHGMLPL FLPEEDTPDD DGIRIISAPT DSDYVSKFLW
SNSEKNRLSV NFMGATDKGK AEFSELSDMV AENPDFAGEA EIQDKFDSQS VVWDYQLASG
AELHILAAHY KDEENLHWGD NYFQNIETEN ALLKTNVAFA VAANHIINIG AEVDNMDYAF
KVRQPLFTCT EFDADCQANR RDVIDVTLPL TVKQQSLFAI DQWQATDALQ LELGLQWHAN
DQTDQTFIHP RGSFALAVSE RVTLKGSAGS YNRLPDVQYS MPELGNPKLQ SYQSKHYSLG
LEGKGLEGKG LEGKGLIGRA LSDWNWSLEL YHKTFSELPR TLAADEPNAE DIYANGTEGE
ARGIDIFINK NFSNRWYGWV ALSYSESTRT NTATDQTLDY TLDTPLVLNV VGNYQLTHNW
NIGFRYTAKS GEANTQIVGV KQNPNFAGHY LPVYGEPFAD RLPMQSRLDF RAERPITVFG
KEGVFFVDVI NLLNRKNVSE IVLDHEKVKE TGELHLVKNV DMEIFPSIGM SLSF
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