| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0284 |
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| Symbol | |
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| ID | 3964903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 351651 |
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| End bp | 354005 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919346 |
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| Product | hypothetical protein |
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| Protein accession | YP_525760 |
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| Protein GI | 90019933 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0213511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000504435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCAACA CACAACTAGA TTGGCTTAAT CACTTTTTAA CTAAACTTTC TAATGGTGGG
TGGGCAGCCA TTTTTACCCC GCACGGGTGG GATATAACCG CCCAAACCGC AACTAGCAGC
CTTACAGTAG ATAGAACACA GCCGGGGTTT GAAGAGTTCG CACTTGCTGG CAATACAGCA
ATTTGCCCAG GCGACCCAAG CTTAAGCTTG CTTTATCACG CCTTAATGCA CCCTGGCGTG
CAACATGCTG ACATTACCTA TTGGCCCGAT ATTAGCGATA TTGATGCGCT AGAAAACTAT
ATATACGGCC TAGCATTTGC CTCTGCGGAT GCCACCACAA TCAAGCGCAA CCTAGCCAAA
CTTTACCCCA TTGTTATGGC TTACGAGTAC CGCATTACCA GCCGCACGCC CCACAAAAAA
CACGCCGATT TAATCTTCTC TCGCACGGGC GTTGGCCGCG TAGGCACCCA CGAACCAGAA
TACGACGCTA GCAGACGTTG CTTTAATACC GCCCCCACCG ACAACAGCGG CGGCGCCCGC
GTACAACCCG CACGCTACGG TTTATTTATG TGCGAAGCAG TACGCCTTGG CGATGAAGTG
GCTATACAGG GCCGAAGCCA AACAAAAGAT AAATATCGCA TCTTTTACAA ACCCGTGTAC
AAATTGTATA ACGGCCTAAA GCTAGGCGAT GAAACACTAA GCATTACGTT TAATCAGTTT
CACCAAAGTG ACAAGCTAGC GCGTATGGTT AAAAAAGGTG GGCTTAAGGT TGATGCTAGC
TTTGATATTA ACAACGCCCC CTTTACCTAC AACAGCAATA AAGACGATAT AGTGGGTACA
GAAGCTAGTG CCGGTAATAT TATTGTTTGG CGTAAACCGC AAGCCATGTG CCGCGCAGCC
GAACAAAACA ATAAAATAGT TACCTTTGAA GTGCCGAAAG AAAGCTTGCT GTGGCTAAAG
TCGCTGTTCG CTAAATTAAA CATTCCCTTC TTTTACAACA ACCGTCGCTA TACCAGCCTG
CGCGTGGGGC AAAACCCGTT ATGGGCAGTA GTAGACTACG GCCTAAATGC ACTGTTTCAA
AAACTAGGGT CCAGCAAGCG CGCGTTTATG TCGCCGCGTC ACGCCGGCGA ATTTACCAAT
ATACGCCACA TACTCGACGA CAACGGCCAA GTGGTAGATT TAAACTTTAC CAGCATCGAC
CAATTTAAAA GCAATTTATC TGAAGGCGGC TATCAAGCCA TAATGTACGA AGACCCAGTA
GCAGAAGGGT TTATTAGCGC AAACATTGCA GGCATAAGTT TGGCTCACCC AGTTAAAGCC
GCTTACTCAT TAATGACCGC CCCCGACTTT ATGCCGCGTA TTGGCAATAT AGATATTTAC
CAATACAACG ACAACTTTGT AGTTGGCGGC AGCCGCGCAT TGTGTGAAGG CCGCCTTGCG
GTAAACCTAC GCCTAACCCA CAGCGACGGC AAAACCCATG TATTCGAAGA AAACGACCAA
ACAGTAACTG CCATTACCGC TATTAACCGC AAACAAACAA CTAGCTGCGC AGGCGAAAAA
GAATATAACA ACACCCATTA CCTTAGCGAC GAAGCGTCAG ATATTTTTGC CCCCGGCTGG
GATGTAACCT ACACCCGCGA TGAGCTTTTC TCTACCCCCT ACTACCACAC CTCTGGCCTT
GGCTCGCCAT TTTTAGAAGA TGTAAAACTA TGTGCCGCAG CCAACGGCAT GTGGCCAGCC
GCATCCCCCG ATGCTGCACG CACCTTTAAA CGCTCCACAC GCACAGCATT CCCACTTACA
GATATAGAAA TAGGCATAGC CCCTGAATGT GCATTAGCCA AAAACCTGAA CACAAATAAT
AAAGGTTGGG ATGGTGAATA CGGCCCATTT ATAGTGGAGT GCGACGGTAC CTTTAAAGTG
AATTACGCCT CTATAGAACG CTCTGATTAT ATTAGTAACT ACGACAACGA ACGCTTCGAC
TTTGCCAAAC TGCGAGAAAT AAACCGCATA GAAGGTAAAC AACGCCTGCA AGATTTAGCG
GAAGTAAATA AAATACTGTT AAATGGCACC GCGCTAGATA AAAGCGGCTA TTGGCTAGTA
AGCCATATGA AAGTAACAAC CAGCAACACT GCCAGCCAAT TTATTAACGC CCCCGATACA
CTTATTGCAA AAGCTAAAGT GGGTGAATGG CTACCCAAAG AAATAACCAA TGGCTACTTT
TATATCTTTG CCTCTTACTC TAAGGGCACA AGCGCCACAA ACGAACCAAT ACGCCGTATT
CAGCCGGTAG ACGAATTTGT ATTTGTTATA ACCTGTGCAG GCAAGCCACC ACAAACACTG
CGCTACAAAA TATAA
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| Protein sequence | MPNTQLDWLN HFLTKLSNGG WAAIFTPHGW DITAQTATSS LTVDRTQPGF EEFALAGNTA
ICPGDPSLSL LYHALMHPGV QHADITYWPD ISDIDALENY IYGLAFASAD ATTIKRNLAK
LYPIVMAYEY RITSRTPHKK HADLIFSRTG VGRVGTHEPE YDASRRCFNT APTDNSGGAR
VQPARYGLFM CEAVRLGDEV AIQGRSQTKD KYRIFYKPVY KLYNGLKLGD ETLSITFNQF
HQSDKLARMV KKGGLKVDAS FDINNAPFTY NSNKDDIVGT EASAGNIIVW RKPQAMCRAA
EQNNKIVTFE VPKESLLWLK SLFAKLNIPF FYNNRRYTSL RVGQNPLWAV VDYGLNALFQ
KLGSSKRAFM SPRHAGEFTN IRHILDDNGQ VVDLNFTSID QFKSNLSEGG YQAIMYEDPV
AEGFISANIA GISLAHPVKA AYSLMTAPDF MPRIGNIDIY QYNDNFVVGG SRALCEGRLA
VNLRLTHSDG KTHVFEENDQ TVTAITAINR KQTTSCAGEK EYNNTHYLSD EASDIFAPGW
DVTYTRDELF STPYYHTSGL GSPFLEDVKL CAAANGMWPA ASPDAARTFK RSTRTAFPLT
DIEIGIAPEC ALAKNLNTNN KGWDGEYGPF IVECDGTFKV NYASIERSDY ISNYDNERFD
FAKLREINRI EGKQRLQDLA EVNKILLNGT ALDKSGYWLV SHMKVTTSNT ASQFINAPDT
LIAKAKVGEW LPKEITNGYF YIFASYSKGT SATNEPIRRI QPVDEFVFVI TCAGKPPQTL
RYKI
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