| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0266 |
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| Symbol | |
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| ID | 3966032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 332263 |
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| End bp | 333780 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919326 |
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| Product | small-conductance mechanosensitive channel-like |
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| Protein accession | YP_525742 |
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| Protein GI | 90019915 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0068339 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCACCA AATCGATTAA GCCGTTTAAA CACATTTATT TTTTAGCCAT TGTGCTGGTA
GTTGCATTCT CACTATTACA CAATGGCTTT CTTGTTGCCA ATAGTTACGC GCAACCCAGC
CAAGCTATTG CAGAGCAAAT TTCGCAAAAT GACGCAGAGC CAAACGGCAA ACAAAGCGCA
GATTCCAACA CTACCGCTGA AGAAGAAAGC GGAAACATTA ATTTAAGCGA TTCCATTCCC
ATTGATGAAG CATTAGAAGT ATGGGAGGAC AAGTTCTCTA GCATATTGGC CGATCTAGGC
CTTAACAATA GCCTGCATGC GCGACTAGCA GCAAGCGCAG CCATTATTGT TATCGCTTTA
ATGCTTATGC TAGTCGCTAA TCGTATAACC AAAAAGGTAC GCCAGCGCAT AACTCATTTA
GCAAGACGCG TGCATCTAAG CCCCTCGAAA ACCCGATTTT ACCAACGTGC AATTTTATGG
TTAATTAACT TTTTACTTGT AGTTGGCGCG GCTAGTGCAC TTGCGGTTAC CTGGGGTGTA
GATACAGACA CACTAGCTAA CGACACAGTA ATGGCAGCCC TTGCCAACCT GTTAACCATC
TATTTTATTG TACTCGCCGG CACAATGATT GTTCATATAG CCAATGGCTT AGTGGAGAGT
CTGTTCAAGC GCTGGGGAAG CAAAAGTCAA TCGCGTACAA ATACGCTTCT GCCTATAGCG
CGCAATACAG TATATGTAAC CTGCTTTGTT GTTTTTACGC TTATGCTACT TGCAGAGCTA
GGCATAAATG TAATGCCGTT ACTTGCTGGT GCCGGTGTAT TAGGTTTCGC CATTGGTTTT
GGTGCGCAAA CACTTATTAA AGATTTACTA ATGGGGTTTA TTATTATTTT TGAAGACCTT
ATTCAAGTAG ACGATGTGGT AACGCTAGCT GGACGCACAG GCATTGTAGA GCGCATTACC
ATTCGCAAGG TTCAACTGCG CGATTTAAGC GGTAACGTAT ATACCATTCC CTTTAGCGAA
GTAGATATTG TTGAAAATAA AACGAAAGAC TTTAGCTATG CCATGCTGGA GATTGGCGTA
GCCTACCGTG AAAACGTAGA CGATGTAATG GCCATGCTAA TAGAAGTGGA CAAGCAGCTA
CAGGACGATG ACGACTTTAA AGATATTTTA CTTGAGCCAC TTGAGATGTT TGGTTTAGAT
AAATTCGGTG ATAGCGCTGT TGTAATTAAA GCACGTATTA AGACTGTGCC ATTACAGCAA
TGGAATGTGC TACGTGAATT TAATCGCCGA GTAAAAATAC TGTTCGACGA ACGCAATGTA
GAAATACCGT TCCCCCATCA AACCATATAC TTTGGCGAGG ATAAAAACGG TACTGCACCG
CCACTGCATT TAAAGGCGGA CTCAAATGAC AAAATATCTG AGCACGCAAC CATAGAAGCT
AAGCCGGCAC AGAAAAAAAC CAATACGGAC AAAGCCAATC AGCCTGCGCC AGATGGCGAT
AGTGGCGAGG ATAGTTAA
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| Protein sequence | MFTKSIKPFK HIYFLAIVLV VAFSLLHNGF LVANSYAQPS QAIAEQISQN DAEPNGKQSA
DSNTTAEEES GNINLSDSIP IDEALEVWED KFSSILADLG LNNSLHARLA ASAAIIVIAL
MLMLVANRIT KKVRQRITHL ARRVHLSPSK TRFYQRAILW LINFLLVVGA ASALAVTWGV
DTDTLANDTV MAALANLLTI YFIVLAGTMI VHIANGLVES LFKRWGSKSQ SRTNTLLPIA
RNTVYVTCFV VFTLMLLAEL GINVMPLLAG AGVLGFAIGF GAQTLIKDLL MGFIIIFEDL
IQVDDVVTLA GRTGIVERIT IRKVQLRDLS GNVYTIPFSE VDIVENKTKD FSYAMLEIGV
AYRENVDDVM AMLIEVDKQL QDDDDFKDIL LEPLEMFGLD KFGDSAVVIK ARIKTVPLQQ
WNVLREFNRR VKILFDERNV EIPFPHQTIY FGEDKNGTAP PLHLKADSND KISEHATIEA
KPAQKKTNTD KANQPAPDGD SGEDS
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