| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0264 |
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| Symbol | |
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| ID | 3966030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 329470 |
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| End bp | 331470 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919324 |
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| Product | Signal transduction histidine kinase-like |
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| Protein accession | YP_525740 |
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| Protein GI | 90019913 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0170548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTA CACGTATTTT ACTGGTTGAA GACGACGAAG ACGATTACGT AATAGCGCGT
GACGTGTTAG AGGAAATATC ATTTCTAGAT ATTGAACTTA TTCGCGCCGC CAACGTAAGT
GCGGCGTACG ATTACCTTAA ACAAAATAAC TTCGATCTCT GCTTATTAGA TTATCAACTT
GGTGCCTTTA ACGGCATCGA GGTGTTGAAG CACGCTAGGG CATCAGGTTT CTCTGCGCCT
ATAATCATGC TTACAGGGCA AGCAGATAGT AAACTAGACG AGCAAGCACT CGATGCCGGT
GCGGCAGATT ATCTAAATAA AAGCGAAATA GGTACAGGTA GATTTATTCG CTCTATTCGC
TACGCGCTGG CAAGACGCGA TGTAGAGCGA GAAAGGGTGG AGCGCCTTAA AGCCGAAGCC
GAAAATGAAT CTAAAAATCG CTTTCTAGCC CATCTTAGCC ACGAGCTGCG CACACCACTC
ACGTCTATTT TGGGCTACAC CGAGTTGCTA TTAAATAGCG ACAAAGGCGC ACAAGCTGCG
GTTGAGTTAG ATGTTATATA CCGTAACGGT AAGCACTTAC TCAATTTACT TAACGATGTG
TTAGACCTAT CAAAAATTGC CGCTGATCGC TTAGAAATAA ATACGAGTAA GGTAGATGTT
GGTAGTCTAA TCGTAGATGT GTACACGCTG TTGCGCGTCA ATGCGATTGA TAAGGGCCTG
AATATCACTT TGGCATCGAC CACGCCTATA CCCACTATCA TCACCTCAGA TTCCACCAGG
CTGCGGCAAA TCATTATTAA TGTGGTGAGT AACGCAATTA AATTTACCGA TGAGGGTGAA
ATAAATATTG CGCTATCTAT GGACGATCAT GCAGGTAAAG AAAAATTATG TGTAGTCGTT
AAAGATACAG GTATTGGTAT ACCCGCAGAT AAACTAGAGG AGATTTTCTC TCCCTTTTCG
CAAGTAGCCG ATGTAATTTC TAAAAGTGTG GGCGGTTCGG GCTTAGGCCT AGCAATAAGC
TCTACACTTG CGAAAATGCT AGGCGGTGAG ATTGTTGTGG AAAGTAAAAT CGGCGAAGGT
AGTCGCTTTA GCATATACAT AGATGTAGGC GATGTTAGTA ATGTGGAGCG CGAGTGGTTA
CGTTTTGATA AGCAAGCCAG CACAGCGCCT AAAAAACTCG AATACAGCCT AGAGGGTAAA
GTGCTGGTTG TAGATGACCT GCGCGATATA CGCAGCTTGG TAGGCCATAT AATAAGCCAG
GTCGGTGTAA AAGCTGAGTA CGCTGCTAAT GGTGCACGCG CCATAGCGGT AATAGAAAGC
GCGCAGCAGG CCGGTAAACC GTTCGATTTA GTGTTAATGG ACATCCACAT GCCAGAAATG
GATGGCAAAC AAGCTGTTAC CCTTTTACGA AATAAGGGCT ATAGCTTACC CATTGTTGCA
TTAACAGCAG CGAGCATGCG TGGTAGCTAT GAGCAGTTGG AAATATGCGG CTTTAATGGA
ATGTTAAGCA AGCCGGTAGA TATAGATAAG TTATTTCAAG TTCTTAATAG TTACTTAATT
CGAAAAGAGA ATGCCAAACC TCCACACGTT AGCCTTGTTG CAGAGTCACC AGCTGCTATG
CCAAGCAAAT CGAGTACCGA ATTAAGTATT CTACTGGTAG AAGACGACCC CGATGCAGCG
AATGCTGTGG CCGAATTAAT GGGGCACTTA GGGGCGCAAG TAAGTGTGGT TAATTCCGTT
AAACATGGAT GTGAGCAATT GCAGGCCAAA AAATGGGATG CAGTGCTAGT AGATAAAAAC
TTAACTGACG GAAGTGGGTT TAGTGTAATA ACTAAAATAG GTGAGCAGGG TGTATCTACT
TATGTTGCTG TGGTTAGTGG CGATGAAATA TCACTGGCAG CCCACCCAGA GCTATCTATT
AATGAAGTGT TACTTAAACC CTTACAGTTA AGCGCTCTCA AGCAACTGGT GGCTAATATA
CGCGGTTACG CTGGCGCATA A
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| Protein sequence | MATTRILLVE DDEDDYVIAR DVLEEISFLD IELIRAANVS AAYDYLKQNN FDLCLLDYQL
GAFNGIEVLK HARASGFSAP IIMLTGQADS KLDEQALDAG AADYLNKSEI GTGRFIRSIR
YALARRDVER ERVERLKAEA ENESKNRFLA HLSHELRTPL TSILGYTELL LNSDKGAQAA
VELDVIYRNG KHLLNLLNDV LDLSKIAADR LEINTSKVDV GSLIVDVYTL LRVNAIDKGL
NITLASTTPI PTIITSDSTR LRQIIINVVS NAIKFTDEGE INIALSMDDH AGKEKLCVVV
KDTGIGIPAD KLEEIFSPFS QVADVISKSV GGSGLGLAIS STLAKMLGGE IVVESKIGEG
SRFSIYIDVG DVSNVEREWL RFDKQASTAP KKLEYSLEGK VLVVDDLRDI RSLVGHIISQ
VGVKAEYAAN GARAIAVIES AQQAGKPFDL VLMDIHMPEM DGKQAVTLLR NKGYSLPIVA
LTAASMRGSY EQLEICGFNG MLSKPVDIDK LFQVLNSYLI RKENAKPPHV SLVAESPAAM
PSKSSTELSI LLVEDDPDAA NAVAELMGHL GAQVSVVNSV KHGCEQLQAK KWDAVLVDKN
LTDGSGFSVI TKIGEQGVST YVAVVSGDEI SLAAHPELSI NEVLLKPLQL SALKQLVANI
RGYAGA
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