| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0262 |
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| Symbol | |
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| ID | 3966028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 327392 |
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| End bp | 328909 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637919322 |
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| Product | bacteriophytochrome-like protein |
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| Protein accession | YP_525738 |
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| Protein GI | 90019911 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.268371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC AAGAATTAGA CAATATACGA AAGCGCTCTC CCGTATGGGA ATATTTTCTC
ACGTTATTTG TATTGGTAAT TATTGGGGTG AATGCTTACT TGGCCTTTTC TACGGTAAAC
GATTTATCCC ACAGGCACCG CAGTATTACC AATACCGGTA ACGTAATTGT AGAGATTAAA
GAACTGAATC AAAGCTTACT GGCGGCCGAG CTAGGTGAGT TGGTTTTCTT ATTGGTAGAA
GACGATACCG AAGTTGATCC ATACCTGGCT GCACTCGAAG ATTTAGATCT GCATGTCAAA
TCGGTAAGGC ACCTTCGCAC AGAAATTCCA GGGCAAGCAG AAGATATCCG TTTACTTGTA
GATATGATTC GCCAGCGCAT TGCGCAGCTG CGTGCTGGTT TAGAGCTTTC TTTAGCAGAT
AAACACGAGC GAGCAATAAA TAAAATAACA ACAAGAAAAG GCGTTGAGAA TCAGAAAAAA
ATTGCAGATC TATTCGATAG AATAGAAACA AGAGAGTTTG CTTTACAGGG TAAGCTCTAT
TCGAAAATGG TGCAAAGCGA TAAAAAATCA CGCAATTTAA TTATTGCATT CTTAGTTATA
AGCAGCTTGT TAGTGGTCGG CGTGTTTGCC ATTCTTAAGC TTACCCTACG CCGCGAAGCA
GTCTATCGAG AAAAACTACA AAAGCGTGCC GATGAGCTTG AAGACAAAGT GCGTCAGCGC
ACTCAGGAAA TAACCCTCTA TTCCGAAGAG CTAGCTCGCA GTAATCAAGA GCTAGAAGAT
TTTGCTTTTG TTGCATCCCA TGATCTGCAA GAGCCCCTTA GAAAAATTTG CACCTTCTCT
GACCGTATGA ATAAAAAGTA TGCCGAGCAA TTAGATGAGA AAGGCCGAGA TTACCTTGTT
AGGCTTAATG GCGCTGCTAC AAGAATGTCT GTACTCATTC ACAACTTACT AGAGTTTTCT
CGTATTCGAA CACGGGGTAA ACCGTTTGTA ACAGTAGATT TAGACCAATT AATTGCAGTC
ATAATAGATG ACCTAGAGAT AGCAATAGAG ACAAACCAGG CGGTAATTAG CATAGATGCC
TTACCTTCTA TTAAGGCTGA TGAAAGTCAA ATGACCCAGC TTTTCCTAAA TCTTTTATCT
AATGCAATTA AGTTTAGAAA GCCTGATGTA ACGCCCATTG TGCAAGTGCG TTATGCATTA
GTACAAAAAG AAGCTATGAA TACCCAGCTT AGTTTTCACG AGATTCGTGT GCAAGATAAT
GGTATTGGGT TTGATATGGA TTACAAAGAC AAAATATTTG TTCCATTTCA ACGTTTGCAT
GCACGCGACG AATATCAAGG TACGGGTATT GGCCTAGCGG TATGTAGACG AATTGTTGAA
CGCCACGGCG GTACTATAGA TGTGGAAAGC GCTGTGGGCG AAGGCTCGAC GTTTATCATT
CATATTCCGG TTGTAAGTAT AGATATGGAA GGTGATATAT CTGAGGCAAT TGAAAAAATA
GAAACACAAA CAGAATAA
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| Protein sequence | MTKQELDNIR KRSPVWEYFL TLFVLVIIGV NAYLAFSTVN DLSHRHRSIT NTGNVIVEIK
ELNQSLLAAE LGELVFLLVE DDTEVDPYLA ALEDLDLHVK SVRHLRTEIP GQAEDIRLLV
DMIRQRIAQL RAGLELSLAD KHERAINKIT TRKGVENQKK IADLFDRIET REFALQGKLY
SKMVQSDKKS RNLIIAFLVI SSLLVVGVFA ILKLTLRREA VYREKLQKRA DELEDKVRQR
TQEITLYSEE LARSNQELED FAFVASHDLQ EPLRKICTFS DRMNKKYAEQ LDEKGRDYLV
RLNGAATRMS VLIHNLLEFS RIRTRGKPFV TVDLDQLIAV IIDDLEIAIE TNQAVISIDA
LPSIKADESQ MTQLFLNLLS NAIKFRKPDV TPIVQVRYAL VQKEAMNTQL SFHEIRVQDN
GIGFDMDYKD KIFVPFQRLH ARDEYQGTGI GLAVCRRIVE RHGGTIDVES AVGEGSTFII
HIPVVSIDME GDISEAIEKI ETQTE
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