| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0260 |
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| Symbol | |
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| ID | 3966026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 325654 |
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| End bp | 326985 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919320 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525736 |
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| Protein GI | 90019909 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.514748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAAG TGCTTTTGGT GGACGACGAT CTCGATTTTT GTGATGCTGC GGCTCAGTTG
ATAACGTTGA TGGGGCACGA TGTAACAGTT TCAAACAGTT TGAGCGAAGC GCATACAGCC
TTAAAACACA CCCGCTTTAG TAATATCTTG CTAGACTTTA TGCTGCCAGA TGGCAGCGGT
TTGCACCTTA TTGATCATTT TAAAGACGAC CCAGACGCCC CGAATATTAC GCTTATTACG
GGTCATCCAT CTGTTAAAAA TATTATGGCT GGCCTTTGTG GGCCGAAAGT TAACTACCTT
ATTAAGCCTA TTAATAAAGC CGATTTAGAA GCCGCCATTA AAATCAACGT TGCCTCTACG
GTGGCCAAGA GTGACCGTCA CTTTGGTTGT TTGGTGGGCG AATCTGCGCC CATGCAAGAG
CTTTACACCA TGATAGAGCG CGTAGCGCGC ACACCGGCCA ATGTAATGCT TATGGGCGAA
AGTGGTGTGG GTAAAGAAGT TGTGGCACAG GCCATACATA ACGCTAGCAA TGCGTCGCGC
GGTGCGCAAT CTAAATTAGT CGCGGCCAAC TGCGGTGCTT TTTCGCGTGA GTTAATTGGC
AGTGAATTAT TTGGTCACGA AAAAGGCGCG TTTACCGGCG CCGTAGCGAG AAAGATAGGT
TTCTTTGAGC AAGCCGAAGG TGGAAGCCTG TTTTTAGATG AAGTAACTGA AATGCCCATA
GATATGCAGC CAAATTTACT GCGTGTGTTA GAAACCAATA AGGTAACACG CGTGGGTGGC
GTTAAAGAAA TAGATATAGA CTGCCGAGTC ATTTCCGCAA CTAATCGCAC TACCGAAGAC
CTGGCCGAAA ATAATGTACT GCGAGAAGAT TTGTATTTTC GTTTAGCCGT TTTCCCCATT
CATATTCCAC CACTGCGTAA ACGCAAAGAA GATATCCCGT TACTAGCGGA ACACTTTTTA
GCCGATTTAA ACGAACAGAA CGGCTGTGCC TATCAATTTA CCCCCGCGCA AATAGAAAAA
TTAACCCAGT ACGATTGGCC GGGTAATGTA CGAGAACTGC GTCATGCCAT ACATCGCGCC
TTTATTATGA GCGACCCAGC CGGTACCGAA GTGGCGCTGC CCAGCGATTT TAGTTCGCCA
TTTACAAAAG TAAAAAAAGC AGAGCCAGGC ATTAGCGCCG GTGTAAAAAT AGACGAAATG
GAAAAAGAGC TCATTCGTAC TACCTTAGAG CACCTAGATG GCGATAAGCC ACAGGCCGCA
GAAATGCTAG GTATAAGTTT AAAAACGCTA TATAACCGGT TAAATAAATA CGGAGAACTA
ACAAGCGAAT AG
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| Protein sequence | MLKVLLVDDD LDFCDAAAQL ITLMGHDVTV SNSLSEAHTA LKHTRFSNIL LDFMLPDGSG
LHLIDHFKDD PDAPNITLIT GHPSVKNIMA GLCGPKVNYL IKPINKADLE AAIKINVAST
VAKSDRHFGC LVGESAPMQE LYTMIERVAR TPANVMLMGE SGVGKEVVAQ AIHNASNASR
GAQSKLVAAN CGAFSRELIG SELFGHEKGA FTGAVARKIG FFEQAEGGSL FLDEVTEMPI
DMQPNLLRVL ETNKVTRVGG VKEIDIDCRV ISATNRTTED LAENNVLRED LYFRLAVFPI
HIPPLRKRKE DIPLLAEHFL ADLNEQNGCA YQFTPAQIEK LTQYDWPGNV RELRHAIHRA
FIMSDPAGTE VALPSDFSSP FTKVKKAEPG ISAGVKIDEM EKELIRTTLE HLDGDKPQAA
EMLGISLKTL YNRLNKYGEL TSE
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