| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0242 |
|---|
| Symbol | |
|---|
| ID | 3968084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 303641 |
|---|
| End bp | 305686 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637919302 |
|---|
| Product | Band 7 protein |
|---|
| Protein accession | YP_525718 |
|---|
| Protein GI | 90019891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT CTACTGCTAT CACTCAATTC CTAATTGTAA TTGCTACACT TATTCTAGCT
GCCTGCAGTG GCTCGGGCGG AGGGGCGAAT TCTGGTGGCT CTAATCCTGG TGCTAGTTCT
AGCTCCAGTT CTTCGTCTTC TTCATCTAAT AGCAGTTCGA GTAGCACTAG TTCGTCGTCC
TCTAGTGGTG GTTCATCCGG TGCCGCGGTA TCGCTCCCAA GCACTATTGC CGCAATGGAT
TTTGTCGCAG CTTACGATAC AGACAACGCA AATTCAGGTG ATTGTGGTAA TGGCCCTGTC
GATATGCAAA CGTCAACCGA TACGCAAGGT GCGGCCTGCA CGGTAGGTTG GACAAAAGCT
GGCGAGTGGT TGGCTTATGA TGTGAGTGTT GCTGTTACCC AAAAAATGGA TATTGTGTTT
CGTGTTGCTA CTAACCAAAA CTCACGTGCC TTAAAAGTAC AGCTAAATAA CAAAACATTG
GGTGTGTTAA ATGTTTCTGG TACAGCGTTT GATGAATGGC AAACTGTATC GCTAAAAGAC
ATAGAAATTC CTGCAGGCAC GCATCAATTA AAACTCGTGT GGATGACCGG GGCAATAAAC
GTCAATACCC TTAGTTTTAC CGCGCACAGC GCCTACGGCC AAACTACCAA TTTGTGGGGC
AGTAACGGTG CCGAACACGA CCCGAGCGGC GTGTTATCTG ATTGGTCTTA TGCTGGTTAT
CACTGGGGTG AAGAAGAGCC GCCGGTAAAA TCGCCAACCA TTAATGTGGT TACCGATCAC
GGTGCGATAG CCGATGACGA TAGCGACGAT AGCGCTGCGT TTATTGCTGC ATTAACCGCA
GCAAATAATG GTGATGTAGT TTACGTACCC GAGGGGCGTT TTATTCTTAC GCAGGTGCTA
AGCATACCGA ATGGTGTTGT GTTGCAGGGC GCAGGCAGCG AATTAACTAC TTTATATATT
CCCACCAACT TAAATGAAGC AACGGGTATA GATCCATCTT TTACTGGTGG GTTTATTGAA
ATGAAAGGTT CGTCGAGTGA CGGCAGTAAA CTTTCTACTA TTACTGCAGC GGCGGCACGA
GGCAGTAATC AAATAACAGT AGAAAGTGTT GCAGGTTTAA CCGTAGGCGA TTGGGTGCAA
ATACAACAAA CCGATGTGAA CGGTAACTTT TTATTAGAGG CCTTGTATGC AGGGTACACC
GCAGGCTTAA GTGATTACAG TAATTTGGTT AACGATGCAG AGTTAGAGTT TTTCAGCCGC
ATAACAAATA TTAGTGGCAA CACACTTACC CTAGAGCGAC CGCTACCCAT TACCGTAAGC
CCTAACTATA TGGCGGAATT ACACAGCGTA TCGGTTGCCT ACGGCGAGGT GGGTTTCGAA
GGAATGACTT TAGAGTTTCC AGAAACAACC TACCCAGGTC ACTTCAATGA GTTAGGGTAC
AACGGCATAG ATATGCGCGC TCAGCACTCT TGGGTGCGAG ATGTTGTAGT AAAAAATATA
GATTATGGTA TTAATTTAAG AGGCTCGCAC TTTGTAAGCA TTTTAGATTT TACTGTAATT
AACACAAATG ATCGCAGTGG CCACCACGGG ATAAGTGTGG GGTCGTCCAC CGATTGTTTA
ATTCGCGGTT TCGATATTCA AGCCGAACTA GTCCACGATT TAACTGTTGA ATGGTATGCG
TATGGCAATG TATTTACGCA AGGGCGAGGC AAAAATATTA CCCTCGATCA TCACCGCGCA
GCAGCCTACG CCAACTTATT TACCCAAATT GATTTAGGTG AAGCAACACG CGCATGGAAA
ACAGGTGGCC GAAGCGATCG CGGATACAAA ACCGCGGTAT ACAGTACGTT TTGGAACATG
ACCGCCGAAC AGGCGATCGA TTGGCCCGCC AATGATTTCG GCCCACGTAT GGTGTTTATG
GGGTTAACCA TGGACGGCAG TCACAGCTCT GTTTTAGATT GGGTGGTAGA AGATATTTCT
GCAGATGATA TATATCCACC AAACCTTTGG TTGTCGCAAA GAGAAAAAAG ATTGGGGCGG
CAGTAG
|
|---|
| Protein sequence | MRISTAITQF LIVIATLILA ACSGSGGGAN SGGSNPGASS SSSSSSSSSN SSSSSTSSSS
SSGGSSGAAV SLPSTIAAMD FVAAYDTDNA NSGDCGNGPV DMQTSTDTQG AACTVGWTKA
GEWLAYDVSV AVTQKMDIVF RVATNQNSRA LKVQLNNKTL GVLNVSGTAF DEWQTVSLKD
IEIPAGTHQL KLVWMTGAIN VNTLSFTAHS AYGQTTNLWG SNGAEHDPSG VLSDWSYAGY
HWGEEEPPVK SPTINVVTDH GAIADDDSDD SAAFIAALTA ANNGDVVYVP EGRFILTQVL
SIPNGVVLQG AGSELTTLYI PTNLNEATGI DPSFTGGFIE MKGSSSDGSK LSTITAAAAR
GSNQITVESV AGLTVGDWVQ IQQTDVNGNF LLEALYAGYT AGLSDYSNLV NDAELEFFSR
ITNISGNTLT LERPLPITVS PNYMAELHSV SVAYGEVGFE GMTLEFPETT YPGHFNELGY
NGIDMRAQHS WVRDVVVKNI DYGINLRGSH FVSILDFTVI NTNDRSGHHG ISVGSSTDCL
IRGFDIQAEL VHDLTVEWYA YGNVFTQGRG KNITLDHHRA AAYANLFTQI DLGEATRAWK
TGGRSDRGYK TAVYSTFWNM TAEQAIDWPA NDFGPRMVFM GLTMDGSHSS VLDWVVEDIS
ADDIYPPNLW LSQREKRLGR Q
|
|---|
| |