Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0242 |
Symbol | |
ID | 3968084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 303641 |
End bp | 305686 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919302 |
Product | Band 7 protein |
Protein accession | YP_525718 |
Protein GI | 90019891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTT CTACTGCTAT CACTCAATTC CTAATTGTAA TTGCTACACT TATTCTAGCT GCCTGCAGTG GCTCGGGCGG AGGGGCGAAT TCTGGTGGCT CTAATCCTGG TGCTAGTTCT AGCTCCAGTT CTTCGTCTTC TTCATCTAAT AGCAGTTCGA GTAGCACTAG TTCGTCGTCC TCTAGTGGTG GTTCATCCGG TGCCGCGGTA TCGCTCCCAA GCACTATTGC CGCAATGGAT TTTGTCGCAG CTTACGATAC AGACAACGCA AATTCAGGTG ATTGTGGTAA TGGCCCTGTC GATATGCAAA CGTCAACCGA TACGCAAGGT GCGGCCTGCA CGGTAGGTTG GACAAAAGCT GGCGAGTGGT TGGCTTATGA TGTGAGTGTT GCTGTTACCC AAAAAATGGA TATTGTGTTT CGTGTTGCTA CTAACCAAAA CTCACGTGCC TTAAAAGTAC AGCTAAATAA CAAAACATTG GGTGTGTTAA ATGTTTCTGG TACAGCGTTT GATGAATGGC AAACTGTATC GCTAAAAGAC ATAGAAATTC CTGCAGGCAC GCATCAATTA AAACTCGTGT GGATGACCGG GGCAATAAAC GTCAATACCC TTAGTTTTAC CGCGCACAGC GCCTACGGCC AAACTACCAA TTTGTGGGGC AGTAACGGTG CCGAACACGA CCCGAGCGGC GTGTTATCTG ATTGGTCTTA TGCTGGTTAT CACTGGGGTG AAGAAGAGCC GCCGGTAAAA TCGCCAACCA TTAATGTGGT TACCGATCAC GGTGCGATAG CCGATGACGA TAGCGACGAT AGCGCTGCGT TTATTGCTGC ATTAACCGCA GCAAATAATG GTGATGTAGT TTACGTACCC GAGGGGCGTT TTATTCTTAC GCAGGTGCTA AGCATACCGA ATGGTGTTGT GTTGCAGGGC GCAGGCAGCG AATTAACTAC TTTATATATT CCCACCAACT TAAATGAAGC AACGGGTATA GATCCATCTT TTACTGGTGG GTTTATTGAA ATGAAAGGTT CGTCGAGTGA CGGCAGTAAA CTTTCTACTA TTACTGCAGC GGCGGCACGA GGCAGTAATC AAATAACAGT AGAAAGTGTT GCAGGTTTAA CCGTAGGCGA TTGGGTGCAA ATACAACAAA CCGATGTGAA CGGTAACTTT TTATTAGAGG CCTTGTATGC AGGGTACACC GCAGGCTTAA GTGATTACAG TAATTTGGTT AACGATGCAG AGTTAGAGTT TTTCAGCCGC ATAACAAATA TTAGTGGCAA CACACTTACC CTAGAGCGAC CGCTACCCAT TACCGTAAGC CCTAACTATA TGGCGGAATT ACACAGCGTA TCGGTTGCCT ACGGCGAGGT GGGTTTCGAA GGAATGACTT TAGAGTTTCC AGAAACAACC TACCCAGGTC ACTTCAATGA GTTAGGGTAC AACGGCATAG ATATGCGCGC TCAGCACTCT TGGGTGCGAG ATGTTGTAGT AAAAAATATA GATTATGGTA TTAATTTAAG AGGCTCGCAC TTTGTAAGCA TTTTAGATTT TACTGTAATT AACACAAATG ATCGCAGTGG CCACCACGGG ATAAGTGTGG GGTCGTCCAC CGATTGTTTA ATTCGCGGTT TCGATATTCA AGCCGAACTA GTCCACGATT TAACTGTTGA ATGGTATGCG TATGGCAATG TATTTACGCA AGGGCGAGGC AAAAATATTA CCCTCGATCA TCACCGCGCA GCAGCCTACG CCAACTTATT TACCCAAATT GATTTAGGTG AAGCAACACG CGCATGGAAA ACAGGTGGCC GAAGCGATCG CGGATACAAA ACCGCGGTAT ACAGTACGTT TTGGAACATG ACCGCCGAAC AGGCGATCGA TTGGCCCGCC AATGATTTCG GCCCACGTAT GGTGTTTATG GGGTTAACCA TGGACGGCAG TCACAGCTCT GTTTTAGATT GGGTGGTAGA AGATATTTCT GCAGATGATA TATATCCACC AAACCTTTGG TTGTCGCAAA GAGAAAAAAG ATTGGGGCGG CAGTAG
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Protein sequence | MRISTAITQF LIVIATLILA ACSGSGGGAN SGGSNPGASS SSSSSSSSSN SSSSSTSSSS SSGGSSGAAV SLPSTIAAMD FVAAYDTDNA NSGDCGNGPV DMQTSTDTQG AACTVGWTKA GEWLAYDVSV AVTQKMDIVF RVATNQNSRA LKVQLNNKTL GVLNVSGTAF DEWQTVSLKD IEIPAGTHQL KLVWMTGAIN VNTLSFTAHS AYGQTTNLWG SNGAEHDPSG VLSDWSYAGY HWGEEEPPVK SPTINVVTDH GAIADDDSDD SAAFIAALTA ANNGDVVYVP EGRFILTQVL SIPNGVVLQG AGSELTTLYI PTNLNEATGI DPSFTGGFIE MKGSSSDGSK LSTITAAAAR GSNQITVESV AGLTVGDWVQ IQQTDVNGNF LLEALYAGYT AGLSDYSNLV NDAELEFFSR ITNISGNTLT LERPLPITVS PNYMAELHSV SVAYGEVGFE GMTLEFPETT YPGHFNELGY NGIDMRAQHS WVRDVVVKNI DYGINLRGSH FVSILDFTVI NTNDRSGHHG ISVGSSTDCL IRGFDIQAEL VHDLTVEWYA YGNVFTQGRG KNITLDHHRA AAYANLFTQI DLGEATRAWK TGGRSDRGYK TAVYSTFWNM TAEQAIDWPA NDFGPRMVFM GLTMDGSHSS VLDWVVEDIS ADDIYPPNLW LSQREKRLGR Q
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