| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0221 |
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| Symbol | ureC |
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| ID | 3967072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 280866 |
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| End bp | 282572 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919281 |
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| Product | urease subunit alpha |
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| Protein accession | YP_525697 |
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| Protein GI | 90019870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.931329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TTAGCAGACG TGCCTACGCT GATATGTATG GCCCAACCGT TGGCGACAAA
GTACGCCTAG CGGATACCGC ATTATGGATA CAAGTAGAAA AAGACTTCAC CATTTACGGC
GAAGAAGTAA AGTTTGGCGG CGGTAAAGTA ATTCGCGATG GCATGGGCCA AAGCCAAGCC
ACCAGTGATA AAACACCAGA TACCGTAATT ACTAACGCGC TAATTCTCGA TCACTGGGGC
ATTGTTAAAG CCGATGTGGC AATCAAGAAT GGTCGAATTT CTGCAATAGG TAAAGCGGGT
AACCCCGATA TTCAACCTGG TGTAACAATT ATTGTTGGCC CCTGCACAGA AGTGATTGCA
GGTGAAGGTC AAATACTTAC CGCAGGCGCA ATAGACTCTC ATATTCATTT TATTTGCCCA
CAACAAATAG ACGAAGCGCT TATGAGTGGC ACTACCACAA TGATTGGTGG TGGCACAGGG
CCAGCAACCG GCACCAACGC AACAACCTGT ACCCCAGGTA AATGGCATAT AGGCAAAATG
TTGCAAGCAG GTGAAAGCTT TGCCATGAAC TTAGGTTTTT TAGGTAAAGG TAATGCAAGT
TTACCTGGTG GTTTGAATGA GCAATTAGAA GCGGGTGCGC TCGGTTTAAA ACTGCACGAA
GATTGGGGTA CAACACCTGC GTCTATTGAT AATTGTTTAA CCGTTGCAGA AAACTACGAT
GTGCAAGTGG CGATTCATAC CGATACGTTA AACGAATCGG GCTTTGTGGA AGATACACTT
GCTGCGTTTA AAGGCCGCAC TATTCACACC TATCACACCG AGGGTGCTGG GGGTGGTCAC
GCGCCAGATA TTATCAAAGC GTGTGGTAGT TCAAACGTAT TGCCTTCTTC AACCAACCCT
ACGCGTCCCT ATACCGTTAA TACGGTAGAT GAGCATTTAG ATATGCTTAT GGTATGCCAC
CACCTCGACC CTAATATTCC AGAAGACGTT GCCTTTGCCG ATTCGCGTAT TCGTAAAGAA
ACTATTGCGG CAGAAGATAT TCTGCATGAT TTAGGTGCTT TTTCTATGAT TGCATCCGAC
TCGCAAGCAA TGGGGCGGGT GGGCGAAGTT ATTTGCCGCA CTTGGCAGAC GGCACATAAA
ATGAAAGTGC AGCGTGGTTT ACTGCCCGAG GATGAAGGCA CAGGCGCAGA TAACTTTCGC
GCAAAACGCT ACATTGCGAA ATACACTATT AACCCCGCGT TAGCGCACGG TGTTGCACAC
GAAGTGGGTT CGATAGAAGT AGGCAAGCTG GCGGATATTA TTTTGTGGAA GCCCGCCTTT
TTTGGCGTTA AACCTTCTTT AATAATAAAG GGCGGTGCTA TTGCCGCTGC ACCTATGGGG
GACCCTAACG CTTCTATTCC CACGCCGCAG CCTGTGCATT ATCGCAAAAT GTTTGGCGCC
TATGGTCAAG CCTGTAAACA AACCTCTGTA AGTTTTGTAA GCCAAGCGGC TATAGATGCG
AGTATTAGCG ATTACTTTCA ATTAGAGCGT CGCTTAGTGG CTGTTAAAAA TTGCCGCAGC
GTAACCAAAG CCGATATGGT ACACAACGCT TACCAGCCGC ATATGGAAGT TGACCCCGAA
ACGTACGAAG TAAGAGCGGA TGGCCAATTA CTTACCTGCG AACCTGCAGA AGAATTACCT
ATGGCACAGC GGTATTTCCT ATTTTAG
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| Protein sequence | MSKISRRAYA DMYGPTVGDK VRLADTALWI QVEKDFTIYG EEVKFGGGKV IRDGMGQSQA
TSDKTPDTVI TNALILDHWG IVKADVAIKN GRISAIGKAG NPDIQPGVTI IVGPCTEVIA
GEGQILTAGA IDSHIHFICP QQIDEALMSG TTTMIGGGTG PATGTNATTC TPGKWHIGKM
LQAGESFAMN LGFLGKGNAS LPGGLNEQLE AGALGLKLHE DWGTTPASID NCLTVAENYD
VQVAIHTDTL NESGFVEDTL AAFKGRTIHT YHTEGAGGGH APDIIKACGS SNVLPSSTNP
TRPYTVNTVD EHLDMLMVCH HLDPNIPEDV AFADSRIRKE TIAAEDILHD LGAFSMIASD
SQAMGRVGEV ICRTWQTAHK MKVQRGLLPE DEGTGADNFR AKRYIAKYTI NPALAHGVAH
EVGSIEVGKL ADIILWKPAF FGVKPSLIIK GGAIAAAPMG DPNASIPTPQ PVHYRKMFGA
YGQACKQTSV SFVSQAAIDA SISDYFQLER RLVAVKNCRS VTKADMVHNA YQPHMEVDPE
TYEVRADGQL LTCEPAEELP MAQRYFLF
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