Gene Sde_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0220 
Symbol 
ID3967071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp280559 
End bp280864 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content45% 
IMG OID637919280 
Producturease 
Protein accessionYP_525696 
Protein GI90019869 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0832] Urea amidohydrolase (urease) beta subunit 
TIGRFAM ID[TIGR00192] urease, beta subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.773173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAG GCGAATACGA TATTCAACCC GGCGAAATAA TATTAAACGA AGGCAGAGCA 
AGGCTCACAA TAACCGTAGA AAACAGTGGC GACCGTCCTA TTCAAGTTGG CTCCCATTAT
CATTTTTACG AAACTAACCC AGCACTTGTT TTCGACCGAG AAAAAACACG CGGCTATCGT
TTAAACATTG CTGCCGGTAC CGCAGTGCGG TTTGAGCCGG GCCAAGATCG CGAAGTAGAG
TTAGTTGAAG TTTCAGGTAA CAAAATTATT TACGGTTTCC GCGGCGAAAT AATGGGAGAG
CTATAA
 
Protein sequence
MKPGEYDIQP GEIILNEGRA RLTITVENSG DRPIQVGSHY HFYETNPALV FDREKTRGYR 
LNIAAGTAVR FEPGQDREVE LVEVSGNKII YGFRGEIMGE L