Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0214 |
Symbol | |
ID | 3967065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 273681 |
End bp | 274346 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637919274 |
Product | hypothetical protein |
Protein accession | YP_525690 |
Protein GI | 90019863 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.621979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAAGTC AAGACATTTT GCTGCTACTA AAACTTGTAT CCCTGCACAA ACAGGAACAA CAAATAGAGG GTGACCACAT AAGCAGAGCA TGGCCTTTGG ACTGGCAAGA CTGGGAGGTT ATTGAAGAAG AGCAATCAGA ACCCGATGAT CTACTACTCC CTGAAAGAAA GTTTGGTACC AATGAATTTA TTGCTTCCCT ATATACCGCT AGAAAGCTTG AGGTAGAGAC AGGGATCAGC AAATCTCAAA TCAACCTATC ACTAAACCGC TGCATTGAAA TTGGATTAGC AAAAAAAGAC CGCAAGATTG GCATCCCTAG AGCCAATGTT AGAGCTTTAT TTGAATTTAT TGTCTTTGGC ATTAAATATG TATTTCCTAC CAAGCCCCAA GAAATAACCC GGGGCATAGC AACTGCATTT GCCGCACCTG TACTAAAAGA AAAACTGATG AGTACTGGGG AGTACGTGCC CATATGGCCA GACGCGAAGG GCAATACAAA AGGACAGGCT GTAGAGCCTT TATATAAGTC TGCTGTACAT GCAGTAAGAC GTGACCCTGA AATGTATTCC ATGCTAGCCC TGGTTGATGC TATACGTATA GGACAGCCTC GCGAAAAGTC TCTCGCAGTT GAATTATTAA AACAGCATTT GGGGGTTTCA GGATGA
|
Protein sequence | MKSQDILLLL KLVSLHKQEQ QIEGDHISRA WPLDWQDWEV IEEEQSEPDD LLLPERKFGT NEFIASLYTA RKLEVETGIS KSQINLSLNR CIEIGLAKKD RKIGIPRANV RALFEFIVFG IKYVFPTKPQ EITRGIATAF AAPVLKEKLM STGEYVPIWP DAKGNTKGQA VEPLYKSAVH AVRRDPEMYS MLALVDAIRI GQPREKSLAV ELLKQHLGVS G
|
| |