| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0211 |
|---|
| Symbol | |
|---|
| ID | 3964789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 271185 |
|---|
| End bp | 271937 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637919271 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525687 |
|---|
| Protein GI | 90019860 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.702396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTCTCA TTGAATCCGT TCAACCTACG CTGGATAAGC TCAAGAAGCG GATTGAGAAA
GAGGGCTTAA GGGATCTTAC GCACCTTGAT TATGACCGAT ATCTTAATAC TTCATTATGG
AGCAAAATTA AGCATTGGAT CTATGAGCGA GATGGCCACA CTTGCAGGAT TTGCTCTTCG
GAGGGACGGT TTATTGAAAT GGACGTTCAC CATAGGAGCT ATGATCTGGA TGTCTTGGAA
GGACGAAATG AAGAAATGCT TGTGACACTC TGCAGGCGAT GTCACACATT GATTGAGCAG
TATCCAGATG GACGCCGGCG GCATGATTTG CAAGAAAAGG ACGTCGAGTA CTTTCGGCTA
ATCGAAATCC ACACCAATAT GTGTAGATCC GGTATTCCTT TAAATCTTTC ATCTAAATTA
ACGAGTCGAT CCATCAATAT TGCTCTTTGG CATGATCAAA ATGAGGCCCT GATATTCACC
TCTTTAGAAT CTCTTTTATT TCACTACTCC ATGGTGGTGT ACCACGCTAA TCGAGAAGCT
ATTCGAATTC CAATGCCATT TGGACGAGAT CGTTTTCATC AGAAATCTGG AGCCAGGTTT
TTTGATCGGG CCGATGGCAA GGTGCTAATG TCGATACGAA TGGTAAATGG TGAAGCCTTA
ATCAAAATAT CATCGAGTAC CGTGGTTCCG TTTCAGGATA CATTAGCTGA GGTTATCGCC
GATAGCGTAT GGAAACCCAC GTCTAGCCTG TAG
|
|---|
| Protein sequence | MTLIESVQPT LDKLKKRIEK EGLRDLTHLD YDRYLNTSLW SKIKHWIYER DGHTCRICSS
EGRFIEMDVH HRSYDLDVLE GRNEEMLVTL CRRCHTLIEQ YPDGRRRHDL QEKDVEYFRL
IEIHTNMCRS GIPLNLSSKL TSRSINIALW HDQNEALIFT SLESLLFHYS MVVYHANREA
IRIPMPFGRD RFHQKSGARF FDRADGKVLM SIRMVNGEAL IKISSSTVVP FQDTLAEVIA
DSVWKPTSSL
|
|---|
| |