| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0204 |
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| Symbol | |
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| ID | 3964782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 263064 |
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| End bp | 263804 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919264 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_525680 |
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| Protein GI | 90019853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2856] Predicted Zn peptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGG TAAAGTCACC AACTTCGGTT TTAAGAGATA TAGGCATCTC CCAACCACAC
GAGATTGATT TAGATTTCAT TGCTTATACA TTGAACGCGG AAGTCATATA CGAACCACTT
CAAGGTTATG AAGCAAATAT ATTTGGATCA AAAGATAAAG CTGTAATAAC TGTTAACAGC
GGTACACAAG TATCTCGCCA GCGTTTTTCT CTCGCACATG AAATTGGGCA TTGGACAAAT
GATCGTGGCA AAAATTTAAG TATTGAGTGC AGTACAGGTG ATATTAACCA AAAACAAAAT
GGTAAAGGGC TTACCGCTCA TCAAGCGCGA GAAGCACGAG CAAACGTTTT TGCTAGTCAT
CTCATGATGC CTGAATTTAT GATGGTCGAT ATTGCTAACA TGCCAGTAAA CATGGACACA
GTGCGATTAA TCGCAAGCAC ATACAATACC TCACTAGTAA GCTCTGCTGG CCGCCTTATT
GAGCTTACAA AAAAACCTGC AATGGTCGCG CTCTGGAGCC ATAACGGGAA TAGACGCTGG
TTTGATCGTA GCACCTCTCT ATCTGACTCC GTTTGGCCAC TACAGTCTAT CCCTCATCCT
CACCAAGCTT TTATTGAGTC TAACAATACT ATTGTTAGTG ATTCAAAGTG GATAGATCCT
AGATCTGCCA AAGGCGAACC CTTGACCGAG AGTGTATTTG ACAACGGATT TGATGTAATT
TCTTTGCTTA GCTGGCCTTA A
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| Protein sequence | MAWVKSPTSV LRDIGISQPH EIDLDFIAYT LNAEVIYEPL QGYEANIFGS KDKAVITVNS
GTQVSRQRFS LAHEIGHWTN DRGKNLSIEC STGDINQKQN GKGLTAHQAR EARANVFASH
LMMPEFMMVD IANMPVNMDT VRLIASTYNT SLVSSAGRLI ELTKKPAMVA LWSHNGNRRW
FDRSTSLSDS VWPLQSIPHP HQAFIESNNT IVSDSKWIDP RSAKGEPLTE SVFDNGFDVI
SLLSWP
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