| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0198 |
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| Symbol | |
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| ID | 3964776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 254575 |
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| End bp | 256242 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919258 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_525674 |
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| Protein GI | 90019847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCA GCGAACAAGG AACCGAACAA GGTGAAGGAC TTGATGTTTT CCTAAATCGG
ATTGGGACCG CACTCAAAAC GCAATTGCCA GGAAGCTATT GGGTTCGCGC AGAAATACTC
AAAGCCGACA CATCGAAAGG TAATCATTTA TCTTTAGAGC TAGCATCCTA CGATGGATCG
CAGGGAGCTA AAGCTCGCGC TTGGATCTGG TCATCCAATA TCAACATTGT ATCTTCTTTT
GAGCAATCAA CTGGCTCCAG CTTGAAAGCC GGTCTAAAAA TTCTTTTTCA ATGCCGGGTG
CAGTTTCATC CTGAATTTGG TCTTTCTCTG GTCGTAGAGA ATATCGATCC TAAATTTACG
TTAGGCGACA TGGAGGCCAA GCTCCAAGCG ATTAGAGAGC GCCTAACTTC GCTGAACGAG
ATTAACCGCA ATAGATATTT GGACAAGCCC AAAGATTTTT GTCGCGTCGC GGTGGTATCG
CCAGAATCTG CAGCCGGATT AGGCGACTTT AAAACAATCG CTGATCGACT GGAAAAATAT
AATCTATGTA AATTTAATTA TTACCCTTCT CTATTTCAAG GTGCAAATGC TGTGGCTAGT
ATTGTTTCAG CAATTTCACA AGTCGTTGTC GATATAGAAA ATGGAAACCA ATACGACGCA
TTAGCCATTG TGCGGGGAGG TGGAGACAAA GCTGGGCTCT ATCAACTCAA CGAAATTAAA
ATCGCTCGAT GTATATGCCG ATCTCCGATT CCTGTGCTCG TTGGGATTGG ACATGAGCGG
GACTCAACCA TACTGGATGA GGTTGCCAAT TGCCGCCTTG CCACTCCTTC TCTCGTAGCC
AGCTTTATTC AAGAAGCCAT TGTTAAAAAT GCAAGGGATG CAAAATTTAA CTACGAATTA
CTCGTGAGGT CCTCGCAGTC TATCTCATCA TTTGCAAAGC AAGAGCTAAG GGATTATAGA
GCAAACATTT CCCTTTTATC ACATAAGAAA CTCGAGTCTG CAAGGCGGCA AGTTACCGAA
CATAATACCA GCCTCACACA TGTTCCGAAC TTACTGATTC AAAACGCAAA GAGACAAAAC
GAAGAAAATT ACATCAACAT TAAACTATTT TCTGGACGTA GCATCCAACA AGCCAAAGAG
CTTGTAAGCG AATCTTTTAG ATCTGCAATA AATGATACCA AGGTTAACAT ACGAAGCATT
GGTTCACATA TCCAGCAACT TAAGATTGAT GTTATACGGC GAGCACATCA CTCAACTTCA
ACGGCAAAAT CGTCAGTCCA ACATTACAAT ATTCAAATGA GGCAAGGAGC ATCAAATTCG
GCTCACCAAG CTAAATCCAG TGTGCTTTAT AAATATGAAG AATCTCTAAA AGCAACAAAG
TACTATTTGG GGCAACAGCG GAATGCCATA GAAAATGAAA GTAAATCGCT GAGAGTAAAT
GCTGCCCAAT CACTCACTGC AATAAAAAGT GACATTAAGA TCTTGGTGGA ACGAGTGCTA
CTACTGGATC CAAGTAAAAT TCTAGCGAAG GGCTTCGCGT TGATAATGTC GAATGAAAAA
AAGGTATTGA CCACTAAAAA GGATGTTCTA AAGCAAAAAA ATGTAAGTTT AAGATTAAAA
GATGGCTTCG TAGAAGCCCA TATATTGGAG GACAATCATG AGCAATGA
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| Protein sequence | MAGSEQGTEQ GEGLDVFLNR IGTALKTQLP GSYWVRAEIL KADTSKGNHL SLELASYDGS
QGAKARAWIW SSNINIVSSF EQSTGSSLKA GLKILFQCRV QFHPEFGLSL VVENIDPKFT
LGDMEAKLQA IRERLTSLNE INRNRYLDKP KDFCRVAVVS PESAAGLGDF KTIADRLEKY
NLCKFNYYPS LFQGANAVAS IVSAISQVVV DIENGNQYDA LAIVRGGGDK AGLYQLNEIK
IARCICRSPI PVLVGIGHER DSTILDEVAN CRLATPSLVA SFIQEAIVKN ARDAKFNYEL
LVRSSQSISS FAKQELRDYR ANISLLSHKK LESARRQVTE HNTSLTHVPN LLIQNAKRQN
EENYINIKLF SGRSIQQAKE LVSESFRSAI NDTKVNIRSI GSHIQQLKID VIRRAHHSTS
TAKSSVQHYN IQMRQGASNS AHQAKSSVLY KYEESLKATK YYLGQQRNAI ENESKSLRVN
AAQSLTAIKS DIKILVERVL LLDPSKILAK GFALIMSNEK KVLTTKKDVL KQKNVSLRLK
DGFVEAHILE DNHEQ
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