| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0196 |
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| Symbol | |
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| ID | 3964774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 252334 |
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| End bp | 254334 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919256 |
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| Product | ATPase |
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| Protein accession | YP_525672 |
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| Protein GI | 90019845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAG AGCAAATATC TATCACCAAT TTCCGTTGTT TTGGCCGGGA GACTACAACT
TTTACGCTTC AGGATAATTC TACCGTTTTT ATTGGCTCTA ATGGTTCAGG AAAGACAGCG
GCAATTCAAG CACTCTCTAG GTTATTTGGT GTTACAAGTA AGCAGCGACA AGTGCGAAAA
ACAGATTTTC ACATCGAGCA TGATAAAGAC GAACTTGCGA GTGGAAGCAC CTTATCTATC
GACGTAATAC TCTCATTCCC TGGGCATGAT GAGCCTGACG GGGCTGACAC AATACCTGAG
TTTTTCCAGC AAATGGCCGT GGAGACGCCC GGCGGAGACC TTAAAGCACG TATAATATTG
AAGGCAAAAT GGATCGATGA CGGAACGCCT TTGGGTTCAG TAGAGGAAGA CATTCGATGG
GCCCCTAGAC TTACAAACAA TTTTGACTGG GAAAAGGATT GCACGAGGGT GCAGGCTTCG
GAAAGAAGCA GAATTCAGCT AATTTATATT CCTGCGCATA GAAATATCAG CGAACAGGTG
ACCAACCTTA TAAAGAGTCG GTTTTGGCAA GCGGCCAAAT GGTCTGATGA GTTTCGCAAT
CACGTCGAAG CACTTTCTAA AAATATTCAA GCTAGTTATG CCAATGAGGC CCCCGCAAAA
TTATTGCTCG AAAAATTATC TTCCCGCTGG AAGCAAGTTC ACGACGCGGA TACTGACACT
GATCCACGAT TGAAATTAAT CGACAGTCGG TTCGAACGTA TAATCCAAAA CGCAGGGTTT
ACATTTTTCC CAAACGAATT TGGTCAAGAG CGAGATCTGG CTGATCTAAG TGATGGGCAA
AAATCCTTGT TTCACATCGC ACTGACCGCC GCCACACTCG AAGCAGAGCT GGCAGCTATA
GAAATGAATT ACGAAGACAG CCCCTTCGAT CATGACAAGA TGAGGAGAGT ATGTTTAACA
CTTCTCGCAA TTGAGGAACC GGAAAATTCG TTATCTCCAT TTTTTCTAAG TCGGATTATC
GAGCAAGCAT TGGAAATCGG CAGTCTTGAC GCCGCTCAGG TATTGATTTC GAGTCACTCT
GCTTCAATTA TTTCGAGATT GGAGCCCGAA AATGTTCGCT ATTTTCGACT TGATAGAAGC
AATCGTACTT CATCTGTGCA AAAAATACTT CTACCGGAAG ACGATGAAGA AGCATCAAAA
TTTATTCGAC TGGCAGTCAA GGCCTATCCA GAAATTTATT TTGCTCGGTG CGTCATACTC
GGTGAGGGTG CTTCAGAAGA AATCGTTATT CCTCGCCTAG CTGAGGCTAT GGGATTCCCA
CTGGATCCTT CCTTTGTACC CGTAGTTCCA TTAGGAGGAC GCTACTGTGT TCATTTTTGG
AAACTACTAA GCGATTTAAA GATCCCCTTC GTTACTCTAC TTGATCTGGA TGCCGGACGG
TCTCATGGCG GTGCAAAATT AGTTCAAGGG ACCGCCGATC GGCTTGATGA AATGGGCATC
GATTGGAACA GTAATTCTGT CGTCGAAGAT AGATTACTTG ATCCTGATAA AATTGATACT
CTGGAAGATG CAGATATTTG GTATGACTTT GATGATAACG ATTGGCTCAA TGTATTTGAG
GCTGAAGGTG TTTATTTTTC TGATCCACTG GATATTGATT TTGCAATGCT TCTCTCGTTT
CCTGAAGAGT ACAAGATTCC AAACCCGGGC GGGCGCGGAC CAAGGAACAC CCCAGAGTCA
ATTGAAAATG CGAAAATCGC AACGCTAAAA ACAGACGGTG ACAGCAGTTT GTACGAAGAC
CAATACGACG ACACCTTCAG GTGGTATCCA TACCTCTTTT TAAATAATAA AAGTAAGCCA
GAAACTCATA TAAAAGCACT TTCCAAACTT AGCAAAGAGA GACTTTCTAG AGATGCACCA
AGGGAGCTTA AAGCCTTGGT ATCCAAAGTA ATAAATATTG TGATGGGAAG TGAAAATGGT
CACCAGAATC AACCCCTGTG A
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| Protein sequence | MKVEQISITN FRCFGRETTT FTLQDNSTVF IGSNGSGKTA AIQALSRLFG VTSKQRQVRK
TDFHIEHDKD ELASGSTLSI DVILSFPGHD EPDGADTIPE FFQQMAVETP GGDLKARIIL
KAKWIDDGTP LGSVEEDIRW APRLTNNFDW EKDCTRVQAS ERSRIQLIYI PAHRNISEQV
TNLIKSRFWQ AAKWSDEFRN HVEALSKNIQ ASYANEAPAK LLLEKLSSRW KQVHDADTDT
DPRLKLIDSR FERIIQNAGF TFFPNEFGQE RDLADLSDGQ KSLFHIALTA ATLEAELAAI
EMNYEDSPFD HDKMRRVCLT LLAIEEPENS LSPFFLSRII EQALEIGSLD AAQVLISSHS
ASIISRLEPE NVRYFRLDRS NRTSSVQKIL LPEDDEEASK FIRLAVKAYP EIYFARCVIL
GEGASEEIVI PRLAEAMGFP LDPSFVPVVP LGGRYCVHFW KLLSDLKIPF VTLLDLDAGR
SHGGAKLVQG TADRLDEMGI DWNSNSVVED RLLDPDKIDT LEDADIWYDF DDNDWLNVFE
AEGVYFSDPL DIDFAMLLSF PEEYKIPNPG GRGPRNTPES IENAKIATLK TDGDSSLYED
QYDDTFRWYP YLFLNNKSKP ETHIKALSKL SKERLSRDAP RELKALVSKV INIVMGSENG
HQNQPL
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