| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0194 |
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| Symbol | |
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| ID | 3964772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 246255 |
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| End bp | 250088 |
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| Gene Length | 3834 bp |
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| Protein Length | 1277 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637919254 |
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| Product | hypothetical protein |
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| Protein accession | YP_525670 |
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| Protein GI | 90019843 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAG CAATCATTGG TCAGAAGAAA TACGACTTTC AGGATAGAGC CTGCATTGCC
ATAATGCTGC ACTTTTACGA TTGTGATAAT GCTGAATTTT TTGTTGAGCG TGAGGGTTGT
GAAGATGGAG TATTGTACTT AAATGACCAA CATAACCATA TTGTTGAAAT ACAAGTAAAA
GGTGCTGATA AACCAGTCAC AATGGATTTT ATTGTGGAGT GCTTGGCACA TATGCCAGAC
AGATCCGCGA AAGATACTCT ACTGGAAAAG CTCATCGAAA ATGATCATTT GTACGTTGTG
CTGGTAATGA CTGGCCGATG TGACGATGAA ACATCCATTT ACACTCACCC TTGGGGATGG
AAGCTAGAAG CACATAAGTC AGGCAAGATA CAAAATAAGA ATGCGTCTAT ACTTTTGGAT
AATCTATCGA GCGCCAAAAT ATATCAAAGT GCAACACCTT CAAAACTCAT GCAAGAACGC
GCAAAACACT GTAACGATCT GGCAGGCCGA TTAACCCCCG CGAATTTGGC CAAAATACTA
CACAAACTAA TCGTTATTGA ACGTACTGAT GATCAGACGA TAAACTCAAT TTGTTGTAAT
ATCCTTCAAC AAAAACATCA TGTCCCACAA GACCAGCATG AAAATGTACT TTTAAAACTC
TATCAGGCGG TTAAAGATGC CAAAGATACA AAAAATATAA TTGATGCTTT CCCTTCGGTT
CGCACCATCA TTGATGAAGC GAAACCAGCG CCAGTCCTCC TTGGTAAATA TGTGTTACGT
GGAGACGAAG ACAACTTTCA CAAGATTCTT GCTACTGAAA ACGTCCTGCT GCTATCTGGC
TCACCAAGAA CAGGAAAAAC CTTTCTAGCT AGAAAACTCG CAACAGATTA TCAATCCAAG
GGCTATAACG TTTTACTTTG TAATGATATA GAAGAAGCAG AACGTTTTCT ATACCATATG
AGCCACCATC CGCGCTTAGC CTTTCTTGAT GACCCGTTCG GTGGCACACA ACTAATTGCT
AATCCTATAC AAGCACTTAC AAAGTTAAAA CAACTTGCCA CTACTCTATC GTCAAAGAGA
AAACTTATTG TTGCACAATC CCAAGATCAG CTTCTATTCA CTACCAATCA AAACAAAATT
GAAGATGTAC AGCTACACGC TAATAGTTTT TTTCAAAGTA AATATTACAC ATCCACGTTT
CTCGTCAATT TATGGCTATC TCTTTGCGAT ACCTATACAG TTGATCCATC GTTAAAGAAA
ATTGTTATCA CTGGGTTACA GAATAATGAT ATTGATCTAG AGCCTGGTTG TTTAAATTAT
TTAGCTATAA ACCATCACGA ATTGAATGAC AACTACGCTC TGGAAAATAT TACTCGTCAT
GCTAGAACTG ATGCAAAAGA TCTATCCCTT GCGTTGACCA ACAATGGTTA CGAACAACTA
TTACAATCCT TAGCTATCAC ATCGTCTACC ATGCATGGTA TAGACGAAAA GGATTTGGCA
TTTATATTAT GTGATGAAGT TCAATTGCCC GAATATGAAG AAGACTGTCA CACATTTTCC
TTGGGTGCAG GCACTCCTAA GGGCTTTGAG CCACCCTGCT ATGACAAGGA ATACACCTTG
TCAGAAGTAC ATCAATCCCA GCTGGATGAT CTTGAGAAGA GAAATATCAT TAATATTGAT
GATAATGGGA CGATTCGCAT TACCCATGCG TTTTATCAGT CAGCAGCAGA GCTAACTTTG
GAAAACCCCA GTGCGAGACT TGCCCAAAAG ATCATTAACA TCACTGAACG CGGCCTTCGA
ACAATAACAC CAATAACAAG TCGCTCAACA GCTCGTAACC TTCATTGGGT TTATACCTAC
CTTGGCAAAA GATTAAAACA ACAGGAGGAG CTGCTTAAAC TCGCCGAAAG TGGCTTAAAA
TCGTTTTTTC CAGCCACTCG TGACCTTTGT TTCGACTTTC TATTGAACCC AAAGGTTTCT
CTGAACGATG GAATGCAAAA AGACTTACAG GAATGGGTTA ACCGCGTTAG TTTTCATTCG
CTTGATAATA TTACTTGGGT CAATGGTGAG GCTGTTATTG ATACCAGTCA CTCTACTGAT
TCATTCTTTC GGCAATATCA ACATGTTAAC GAAGGTGAGG TAATAGACTA TTTGCAAACC
TTAGATGGAA ATAGCGAGAC TTTTTTAACA CCTGAGCAAA TAGAGAAAAT ACTAAGATTC
TATTCAGCGC AACCTGATAA AATTTCTCAT CATGCTGTAA AAACTTTATT ATCCAATGAT
GTCGCCATCA TTCGCTCTGA AGTTGCCAGA ATATGGCTTT CTATTACACG TACTGATGAC
AATGATATAT TAGAAAGAAT ATTTCAAGAG AACCACCCCA GCGTTGCATT AGCAGTACTA
AATGCAACCA TCATTAGCTG GGAAACGCTC ACACAAGAAC GGCAAGATAA ACTGATTGCC
GGTCTTATCC AGATGTCTGA ATGCGTATCT AACGCAATTG CCATGATGAA TCCTCTGGTC
ATCTTCGAAA GAACGCAGGA AGAATATGAC ATTACTCCAC CTTGGCCTGT TTTTGAGGCA
ATTATGCCAA TTGTAATATC AAAACTGCCC ATAAACGCGA CATTTTCTGA CGCGCGTATG
TTTAATGTAT TTAGAGAAGC GGTGCCGCAT GTAGGCGCTA ATACAATGCT TGCTATTTGT
GATAGCTGGA TGGGATATTT AGAAAATCAA CTTGACAATC AAATGTTGCC AAGTAACTTC
TCCCTTGGTG TGGCAAAAAT TTTAATGTCT ACCACGAAAA AATACCCTGA AAAGCGAGAA
AAGAGAATTG AGCGTTTGCT CTCCTTTACT TCTACGCCGG CATTAATGGC CATTATCAGT
GACTTGGTAG ACGACTGGCA ACATCTAACA ATTGAGGAGA GAGAAGCATT AACCGATACC
TTAACAGGTA ATCGTACGGA TAAAATATGG CTACAAGCGA TTGTTATAAC CAGTGCAAAC
GTCCCTGCCT CACTTCAGAA AGTTATTTTG GGAACACAAC TTTCTCTTGA TGACAGCCCC
AATACTATTT TGGAAATAAT GGAGCCTTCC TTGCTTAACG CCTCCATGAA AGTTTTCTGC
GGCAACCCTC AGCCATTGTG GTGGATCGGC TGTCATCACA ATTCCACCAA AGAATGGGAG
CCCATTATTG AGTTAATAGC CCGATCACCT GATCATGACC TTTTTGAACT TGCCTGGAGC
GAAATTACCT TTGGCGGCGA CGGCAAGCGA GTAGCAAGCG TTATTAATGA TGTCGGCGTT
AAACATGCTG AGAGAATGCT CGATCTTCTA CTGAAAATCA AACTGGATTG CACAGGGAAT
TATATGCCTG AAGCTTGGTC TGCACTGTTC TCACTAGCTC CTAACAAAGA AACAAAACAG
CAGTGGTTTG AAATAGTTGA TCCATATCTT CCTGATATTC TTGACGATCC TTTTGATATA
GAACTCTGGT TGAGTGACAA GGACGTTTTC GAACTAGCTT GTGAAATGTT GCAAGAGGAC
TTTCATAATT TAAGACTCTA TAGCCAACTA TTGAAAGCAA AAGAAAATAA TGATGTATCA
TTATATGCAG AATATATCAA ACTGCTGGAT AAAGTATTTG ATAGTTACCC TCCACGCTTA
TTTGGCACCT GCGATTGTAT ATTACGTATT TTAAAGAAGA TTCCCAATAT TCCACCTAAA
ATCTCTAATG CTGTTCAAGC AAAAAGAAAA GCTATATTAG ATGCAAAGCA TGATGACAGC
ACAAAGCCCA AGTTGAAATT CGATGATATT ACTGACTGGT CAAAGTCACC TTGA
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| Protein sequence | MTIAIIGQKK YDFQDRACIA IMLHFYDCDN AEFFVEREGC EDGVLYLNDQ HNHIVEIQVK
GADKPVTMDF IVECLAHMPD RSAKDTLLEK LIENDHLYVV LVMTGRCDDE TSIYTHPWGW
KLEAHKSGKI QNKNASILLD NLSSAKIYQS ATPSKLMQER AKHCNDLAGR LTPANLAKIL
HKLIVIERTD DQTINSICCN ILQQKHHVPQ DQHENVLLKL YQAVKDAKDT KNIIDAFPSV
RTIIDEAKPA PVLLGKYVLR GDEDNFHKIL ATENVLLLSG SPRTGKTFLA RKLATDYQSK
GYNVLLCNDI EEAERFLYHM SHHPRLAFLD DPFGGTQLIA NPIQALTKLK QLATTLSSKR
KLIVAQSQDQ LLFTTNQNKI EDVQLHANSF FQSKYYTSTF LVNLWLSLCD TYTVDPSLKK
IVITGLQNND IDLEPGCLNY LAINHHELND NYALENITRH ARTDAKDLSL ALTNNGYEQL
LQSLAITSST MHGIDEKDLA FILCDEVQLP EYEEDCHTFS LGAGTPKGFE PPCYDKEYTL
SEVHQSQLDD LEKRNIINID DNGTIRITHA FYQSAAELTL ENPSARLAQK IINITERGLR
TITPITSRST ARNLHWVYTY LGKRLKQQEE LLKLAESGLK SFFPATRDLC FDFLLNPKVS
LNDGMQKDLQ EWVNRVSFHS LDNITWVNGE AVIDTSHSTD SFFRQYQHVN EGEVIDYLQT
LDGNSETFLT PEQIEKILRF YSAQPDKISH HAVKTLLSND VAIIRSEVAR IWLSITRTDD
NDILERIFQE NHPSVALAVL NATIISWETL TQERQDKLIA GLIQMSECVS NAIAMMNPLV
IFERTQEEYD ITPPWPVFEA IMPIVISKLP INATFSDARM FNVFREAVPH VGANTMLAIC
DSWMGYLENQ LDNQMLPSNF SLGVAKILMS TTKKYPEKRE KRIERLLSFT STPALMAIIS
DLVDDWQHLT IEEREALTDT LTGNRTDKIW LQAIVITSAN VPASLQKVIL GTQLSLDDSP
NTILEIMEPS LLNASMKVFC GNPQPLWWIG CHHNSTKEWE PIIELIARSP DHDLFELAWS
EITFGGDGKR VASVINDVGV KHAERMLDLL LKIKLDCTGN YMPEAWSALF SLAPNKETKQ
QWFEIVDPYL PDILDDPFDI ELWLSDKDVF ELACEMLQED FHNLRLYSQL LKAKENNDVS
LYAEYIKLLD KVFDSYPPRL FGTCDCILRI LKKIPNIPPK ISNAVQAKRK AILDAKHDDS
TKPKLKFDDI TDWSKSP
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