Gene Sde_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0190 
Symbol 
ID3967975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp239706 
End bp241214 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content40% 
IMG OID637919250 
Producthypothetical protein 
Protein accessionYP_525666 
Protein GI90019839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGT GCGGTCGCTG TGAGTCATCA AAATATCGAA TTAGGCGCGT AGAACGAGGC 
GTTCCCTACT GTGAAAAATG CTACACACAT ATGTTTCCGT TGACTTCTTG CTGTAGATGT
TTGGCAGAAG CGAGAATATT TAAATTCGAT GAGATAAAGA TTTGCCGCAA ATGCAGAAAT
GTATCGCTCA ATTGTGCCCG GTGCAAAAAA GGAATTGATA AAGCCTCAAG AAGGGTTGGC
GATTCGCCAT TATGCGGTTC TTGTGCAAAT GTATTTTATA GAGAGGAAAC CAACAATAAA
TCTGTATATG AATCAGTTGG GGGTAAAAAT TCGGAATTCA AAAAACTTGG CGTATCTACC
AAATTCATAA CGTGTAAACA CTGTGGTAAG CATAGAAAGC AAAGCCCAAG CTATAACGAA
AACGGCTTGT GTATTGAATG TTTTGAGCGT GGTTGCCCTC ATCACGATTG CCCTCAATGC
GGGAATGCTG TGGCTGGGAT CGGAAATTCT ATATGTTCGT ACTGTGATCG AAAAAATAAA
GTTCAAGCAC GCATAATTCT GAATGTAGAA ATGCTTGAAG GAGAAGACTT TAGAGAAAGG
TTCTTGGTTG CTGCAAAACA TATATTAAAT AAGTCATCAT CAGTTCAGCT GGTTGGAAGG
GTTGATAGGC TAGCATCCGC ATTTAGATTT TTGGAAGTGC GTTCGAAAAA TGCTGAGAGT
GTAGATCAGA AGCTAATAAT GGATTCGATT GAGGATGAGA TTTCTAGATC CTATTCGACC
TTGGCAAATA TATTGTGTGA AGCATTCTTT GTTGAGTGGA ATGCCGAAAT TGAGAGTGAC
ATTCAGGAGT CGCGCCGAAT ACAAGACATT ATTTCTCGAA ATGATGAGCG GGCTACGGTT
GTGCTTAAGA AATACCTAGA TTATCTGCTA TGTAAAGGAA GTAAAAATTA CAAAAAGAAA
ACTATTCGAG TTTATTTAAG ATGTGCGGAA GCATTTTTAT ATTCTTTATG CAAAAGCAAT
ACTTTATTGG AGTGTTCCCC AGAATCTGTT AGAAATTTTC AGTTGCGAAA CCCGGGTTTG
CGAGCGTCAC TGCGGGTGTT TTTTAATTTT GTTGAGTATT TCAGTGGGGT GAGGTATGCA
TCTCTGTCTA TCCGGAAAAC AGATGAAAAG AAGCTCGATC GGTTGCTCAG AGAAAAGTGC
AGGGTTCTAT CTGCGCGAAT TGATAAATCT AGTGACCTTT CTGAGAGGAA GGCATTAACA
GCTAAGATGC TCAGTTTGCT TTATGGAATT CCTTTGGGGC TGGTTGTTAA TCAGACGGTC
GATAGTTTTT TTGTTGATGG AGCTAAAGTT TACTGGAGGA TAGATGAAAG CATAATACTG
ATCCCACAAA TTGTCTCGAG TTATCTTATT GAATCAATCT CTAGCGAAAA ATCAAGATTT
GTGTTTTGGG GGGATGGAAA GGAAAGGCCT ATGTCGACTG CGTCGGTGAA CTATTGGAGC
ACCATTTGA
 
Protein sequence
MRECGRCESS KYRIRRVERG VPYCEKCYTH MFPLTSCCRC LAEARIFKFD EIKICRKCRN 
VSLNCARCKK GIDKASRRVG DSPLCGSCAN VFYREETNNK SVYESVGGKN SEFKKLGVST
KFITCKHCGK HRKQSPSYNE NGLCIECFER GCPHHDCPQC GNAVAGIGNS ICSYCDRKNK
VQARIILNVE MLEGEDFRER FLVAAKHILN KSSSVQLVGR VDRLASAFRF LEVRSKNAES
VDQKLIMDSI EDEISRSYST LANILCEAFF VEWNAEIESD IQESRRIQDI ISRNDERATV
VLKKYLDYLL CKGSKNYKKK TIRVYLRCAE AFLYSLCKSN TLLECSPESV RNFQLRNPGL
RASLRVFFNF VEYFSGVRYA SLSIRKTDEK KLDRLLREKC RVLSARIDKS SDLSERKALT
AKMLSLLYGI PLGLVVNQTV DSFFVDGAKV YWRIDESIIL IPQIVSSYLI ESISSEKSRF
VFWGDGKERP MSTASVNYWS TI