Gene Sde_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0176 
Symbol 
ID3967960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp217187 
End bp217969 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content41% 
IMG OID637919235 
Productubiquinone/menaquinone biosynthesis methylase-like protein 
Protein accessionYP_525652 
Protein GI90019825 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAATC ATAGCTTTTA TAACACCCCA GAGATAGTTA AGGGTTATGC TCAAGAAACA 
CACTTGCAAG CACCGGAAGA GTCTATATTA AGTGAGTTAA TTGCAGAGCT CGCCCAACTT
AAAGTATTAG ATATAGGCGT GGGAGGCGGA AGAACAACAT TACACCTTGC AGGGCGCTGT
AAGGCTTATA CGGGCGTAGA TATAAATCAA AATATGATTT TGGCCTGCGA GCAACGCTTC
AAAAATTGGC CGTGCAATTT AACGTTTAGT ATTGCGGATG CAAGAACACT AGAAAACCTA
GAAGATAATT CATTCGACTT AGTGCTATTT AGTTTTAACG GCATAGACTA TGTAAACCAT
CAAGACCGCT TACGCGCCTT AGCGAGCATC TACCGTGTAT TGCGTCCGGG CGGTTATTTT
GTTTTTTCGA GCCACAACAC AAACTGCATT TCATCTCTGC TATCGTTGCG TACACACCTA
TCACGCAACC CTATTAATAC AGCGCGAGGG TTGGCGCAAT GGTTCAAATT AAACTTTATA
CACAACAAAC GCACAACACT TCAGCAAGCT AGTAAATCAG CAAAAATAAT GCTTAACGAC
GGGGCGTTTA ATTTTGGGCT ACAAACTTAC TATGTGTCCG TGCAGGAACA AATACGTCAA
TTTGACGGCA TGTTTAGTGT CAAAAATATT TACTCATTAA CTACAGGTAA ACCATTTACC
TCTCGCGAAA GTGCCGAGGC TTCTACCGAT TCATGGTTAT ATTATTTATG CACAAAAACT
TAA
 
Protein sequence
MENHSFYNTP EIVKGYAQET HLQAPEESIL SELIAELAQL KVLDIGVGGG RTTLHLAGRC 
KAYTGVDINQ NMILACEQRF KNWPCNLTFS IADARTLENL EDNSFDLVLF SFNGIDYVNH
QDRLRALASI YRVLRPGGYF VFSSHNTNCI SSLLSLRTHL SRNPINTARG LAQWFKLNFI
HNKRTTLQQA SKSAKIMLND GAFNFGLQTY YVSVQEQIRQ FDGMFSVKNI YSLTTGKPFT
SRESAEASTD SWLYYLCTKT