Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0176 |
Symbol | |
ID | 3967960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 217187 |
End bp | 217969 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637919235 |
Product | ubiquinone/menaquinone biosynthesis methylase-like protein |
Protein accession | YP_525652 |
Protein GI | 90019825 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAATC ATAGCTTTTA TAACACCCCA GAGATAGTTA AGGGTTATGC TCAAGAAACA CACTTGCAAG CACCGGAAGA GTCTATATTA AGTGAGTTAA TTGCAGAGCT CGCCCAACTT AAAGTATTAG ATATAGGCGT GGGAGGCGGA AGAACAACAT TACACCTTGC AGGGCGCTGT AAGGCTTATA CGGGCGTAGA TATAAATCAA AATATGATTT TGGCCTGCGA GCAACGCTTC AAAAATTGGC CGTGCAATTT AACGTTTAGT ATTGCGGATG CAAGAACACT AGAAAACCTA GAAGATAATT CATTCGACTT AGTGCTATTT AGTTTTAACG GCATAGACTA TGTAAACCAT CAAGACCGCT TACGCGCCTT AGCGAGCATC TACCGTGTAT TGCGTCCGGG CGGTTATTTT GTTTTTTCGA GCCACAACAC AAACTGCATT TCATCTCTGC TATCGTTGCG TACACACCTA TCACGCAACC CTATTAATAC AGCGCGAGGG TTGGCGCAAT GGTTCAAATT AAACTTTATA CACAACAAAC GCACAACACT TCAGCAAGCT AGTAAATCAG CAAAAATAAT GCTTAACGAC GGGGCGTTTA ATTTTGGGCT ACAAACTTAC TATGTGTCCG TGCAGGAACA AATACGTCAA TTTGACGGCA TGTTTAGTGT CAAAAATATT TACTCATTAA CTACAGGTAA ACCATTTACC TCTCGCGAAA GTGCCGAGGC TTCTACCGAT TCATGGTTAT ATTATTTATG CACAAAAACT TAA
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Protein sequence | MENHSFYNTP EIVKGYAQET HLQAPEESIL SELIAELAQL KVLDIGVGGG RTTLHLAGRC KAYTGVDINQ NMILACEQRF KNWPCNLTFS IADARTLENL EDNSFDLVLF SFNGIDYVNH QDRLRALASI YRVLRPGGYF VFSSHNTNCI SSLLSLRTHL SRNPINTARG LAQWFKLNFI HNKRTTLQQA SKSAKIMLND GAFNFGLQTY YVSVQEQIRQ FDGMFSVKNI YSLTTGKPFT SRESAEASTD SWLYYLCTKT
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