Gene Sde_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0168 
Symbol 
ID3964802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp206123 
End bp207091 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content42% 
IMG OID637919227 
Producthypothetical protein 
Protein accessionYP_525644 
Protein GI90019817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATAA AACCAATAAT CGATCTCAAC CCAAGTACCT ACGCACGTCA TGCTATACAC 
GGCGAAGAGC GTATATGGGC AGAAACAAAT TGCTATGTAG ATGTGTTGGT TGAGCTTATC
CACTCGCTGG GTTACGACCC TGTGGCAGGG TTGGCGTTTA CGTTAAGTGT CGATTTTGAA
GAAGACCAGT GGACGTTTTT TAAATATCCG CCAGGCGATT TACTCGAGCT TTACGGTTTA
GATATTCAAG AGCTTAACCC ATGGAAAAAC CTCGTTGAGC ATGTAGCCAA TCAGGTGCAC
GCAGCAAAAC CAGTGTTGGT TGAGCTAGAT TCGTACTTCC TGCCAGATAC CGCAGGCTCT
GCTTACAAGC AAGAGCATGT AAAAAGTACA GTCGCGGTTA ACGCCATTGA TATTAATAAA
AAGTTTATGG GGTATTTTCA CGGTCAAGGT TACTACGAAC TTAACGGTGA CGATTTCGAT
AATATATTTC AGCTAAATGG CTTAGTGCAC GAGCGCATGT TGCCGCCGTA TATAGAGCTT
GTTAAAACGC GCGGGCAAGA TCAAAGTAAA TTATTTGAAA AATCCCTCGT TACTTTTGAG
CGCCATATTC AATTAATGCC AGAGTTGAAC CCCTTTGAAA AATTTAAATT GCAATTCGAG
CAAGACCTAA AATGGTTGCT CAATGCCGAG CTAGAAGCTT TTCATAAATA CTCTTTTGCC
AGCTTACGGC AGTACGGCGC GTGTTTTGAA TTATCGCTTA CTTATTTGCA GTGGCTGCAA
CAGCATGGCA AAAATGGTTT AGACGATGCT GCCATAACGG CTTGTCGCAG TATTTCCGAA
ACCGCTAAAG CATTTCAGTT TCAGTTGGCT CGCTCAATAA TGCGCAAAAA GCCGCTTAAT
TTAGAGCCGC TAGAAAACAT GGCTTCACAA TGGTTGATAT TAAAATCTAC CTTGCGAAAT
ACAATTTAG
 
Protein sequence
MDIKPIIDLN PSTYARHAIH GEERIWAETN CYVDVLVELI HSLGYDPVAG LAFTLSVDFE 
EDQWTFFKYP PGDLLELYGL DIQELNPWKN LVEHVANQVH AAKPVLVELD SYFLPDTAGS
AYKQEHVKST VAVNAIDINK KFMGYFHGQG YYELNGDDFD NIFQLNGLVH ERMLPPYIEL
VKTRGQDQSK LFEKSLVTFE RHIQLMPELN PFEKFKLQFE QDLKWLLNAE LEAFHKYSFA
SLRQYGACFE LSLTYLQWLQ QHGKNGLDDA AITACRSISE TAKAFQFQLA RSIMRKKPLN
LEPLENMASQ WLILKSTLRN TI