Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0167 |
Symbol | |
ID | 3964801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 205197 |
End bp | 206132 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919226 |
Product | hypothetical protein |
Protein accession | YP_525643 |
Protein GI | 90019816 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTATTT CAGATCAGCC CATTACAGAA GCCTACCTCG CTTACCAAAA AGAGCTAGTA GATGCAGGGT TACTTATTCC CTCTGGTGTA AAAGGCGTAT ACGGCCGCAG TGGTTTATTT GAAAAAGTGG TCGATCAATT TGAGGCTTTC GCGACACGCA TGGGGGCCGA TGCCAATGCC GAGGTGATGC GTTTCCCTCC CATTTTTGGC CGTCACACCT ACATGCAAAC CGACCACGTA GAAACCATGC CCGACTTAAT GGGGTCGGTA AATTCGTTTT GTGGCAACGA AAAAGAACAT CGTGCACTTA TTGCAAAAAT CGAAGAAAAA GACGAAAACT GGTGTAAAGA TTTAACCCCC ACCGATGTAA TGTTAGTGCC GGCGGCGTGT TACCCGCTGT ACCCAACCGC ATCGGGTTCG GTTTTACCTG AGGGCGGGCG CACAGTTGAT TTAAAAACAT TTGTGTTTCG TCACGAGCCT TCGGACGACC CAGCGCGTAT GCAAATATTT AGGCAGCGCG AATATGTGCG TTTAGGCACG CCAGAGCAAG CTTTGCAGCA TCGCAACCAC TGGTTGCAAA CTGCCGAAGG TATGCACAAA GAGTTGGGCC TAGAGGTAGA AGTGGTTGTT GCTAACGATC CATTTTTTGG TCGCGGTGGC CGCGTAATGA AAGCAACCCA GCGCGAACAA GAATTAAAAT TTGAAATTGT TACGCCAATT TGTAGCGAAG AAAAGCCCAC TGCTATTACA TCCTGCAATT GCCATCTAGA TCACTTTGGT CATTCGTTTA ATATTAAAAC AGCCGATGGT GAGCCAGCAC ATACATCGTG TATTGGCTTT GGGTTAGAGC GCATAGCTTT AGCGTTATTT AAAACCCACG GTTTAGACCC GTCGCGTTGG CCAGAAAAAG TGCGAAAAAC ACTGCAATGG ACATAA
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Protein sequence | MCISDQPITE AYLAYQKELV DAGLLIPSGV KGVYGRSGLF EKVVDQFEAF ATRMGADANA EVMRFPPIFG RHTYMQTDHV ETMPDLMGSV NSFCGNEKEH RALIAKIEEK DENWCKDLTP TDVMLVPAAC YPLYPTASGS VLPEGGRTVD LKTFVFRHEP SDDPARMQIF RQREYVRLGT PEQALQHRNH WLQTAEGMHK ELGLEVEVVV ANDPFFGRGG RVMKATQREQ ELKFEIVTPI CSEEKPTAIT SCNCHLDHFG HSFNIKTADG EPAHTSCIGF GLERIALALF KTHGLDPSRW PEKVRKTLQW T
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