Gene Sde_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0167 
Symbol 
ID3964801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp205197 
End bp206132 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content47% 
IMG OID637919226 
Producthypothetical protein 
Protein accessionYP_525643 
Protein GI90019816 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTATTT CAGATCAGCC CATTACAGAA GCCTACCTCG CTTACCAAAA AGAGCTAGTA 
GATGCAGGGT TACTTATTCC CTCTGGTGTA AAAGGCGTAT ACGGCCGCAG TGGTTTATTT
GAAAAAGTGG TCGATCAATT TGAGGCTTTC GCGACACGCA TGGGGGCCGA TGCCAATGCC
GAGGTGATGC GTTTCCCTCC CATTTTTGGC CGTCACACCT ACATGCAAAC CGACCACGTA
GAAACCATGC CCGACTTAAT GGGGTCGGTA AATTCGTTTT GTGGCAACGA AAAAGAACAT
CGTGCACTTA TTGCAAAAAT CGAAGAAAAA GACGAAAACT GGTGTAAAGA TTTAACCCCC
ACCGATGTAA TGTTAGTGCC GGCGGCGTGT TACCCGCTGT ACCCAACCGC ATCGGGTTCG
GTTTTACCTG AGGGCGGGCG CACAGTTGAT TTAAAAACAT TTGTGTTTCG TCACGAGCCT
TCGGACGACC CAGCGCGTAT GCAAATATTT AGGCAGCGCG AATATGTGCG TTTAGGCACG
CCAGAGCAAG CTTTGCAGCA TCGCAACCAC TGGTTGCAAA CTGCCGAAGG TATGCACAAA
GAGTTGGGCC TAGAGGTAGA AGTGGTTGTT GCTAACGATC CATTTTTTGG TCGCGGTGGC
CGCGTAATGA AAGCAACCCA GCGCGAACAA GAATTAAAAT TTGAAATTGT TACGCCAATT
TGTAGCGAAG AAAAGCCCAC TGCTATTACA TCCTGCAATT GCCATCTAGA TCACTTTGGT
CATTCGTTTA ATATTAAAAC AGCCGATGGT GAGCCAGCAC ATACATCGTG TATTGGCTTT
GGGTTAGAGC GCATAGCTTT AGCGTTATTT AAAACCCACG GTTTAGACCC GTCGCGTTGG
CCAGAAAAAG TGCGAAAAAC ACTGCAATGG ACATAA
 
Protein sequence
MCISDQPITE AYLAYQKELV DAGLLIPSGV KGVYGRSGLF EKVVDQFEAF ATRMGADANA 
EVMRFPPIFG RHTYMQTDHV ETMPDLMGSV NSFCGNEKEH RALIAKIEEK DENWCKDLTP
TDVMLVPAAC YPLYPTASGS VLPEGGRTVD LKTFVFRHEP SDDPARMQIF RQREYVRLGT
PEQALQHRNH WLQTAEGMHK ELGLEVEVVV ANDPFFGRGG RVMKATQREQ ELKFEIVTPI
CSEEKPTAIT SCNCHLDHFG HSFNIKTADG EPAHTSCIGF GLERIALALF KTHGLDPSRW
PEKVRKTLQW T