| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0163 |
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| Symbol | |
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| ID | 3964797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 201000 |
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| End bp | 202121 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919222 |
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| Product | methylitaconate delta2-delta3-isomerase |
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| Protein accession | YP_525639 |
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| Protein GI | 90019812 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAA TACCTTGCGT AATTATGAGA GGGGGCACCT CAAAAGGGGT GTATATCAAC
GAAGCCCACC TTCCTGCAGA AGCCGAAGCT CGCGACACCT TATTGTGCAA CTTGTTTGGT
AGTAGCGACC CTCGTCAAAT AGACGGAATA GGCGGGGGCG ATCCGTTGAC AAGCAAGGTG
GCCATTCTTG CTGCGCCAAG CCACCCAGAT GCCGATGTAG ATTACATATC GGGCGAAGTA
CGCTTACGCC GCCACGAAGT TAACTACGGC ATTATGTGCG GCAACTTAGC CGCGGGTGTT
GGTCCTGCCG CTGTGCAAAT GGGGTTAGTT GACCCGCAAA AGTGCTCTCA TTCGGTAAAA
GTTTTTAATC GAAATTCCGG CTCAGTTATC GATGCGCATT ACCTGCAGCC ATTGGATAGT
GAGTTGGGAA CCTGTTTTTC CGCCAAGCTT ATTTTTAATA ATCCTATCGG CAACCACACG
GGTTGTTTAC TGCCCACCGG TAATCCTGTT GATATGGTTA GTATTCGTGG CATAACGGTG
AAGTATTCGG TGGTGGATGC CGGCGCTGTT TACGCTTTTG TTAGTGCCAA TGAGCTCGAT
TTGAAAGGCT GCGAAACACC AGCTGAAATA GATGCGATGG TATTGGTAAG AGAGTGGGTG
GAACTATTTA GGCAGCATGT GGCGGAGACT ATTAATTGTT TGCAGGTAGC TTCCAAGCAG
GTGAATGTTG GGCAGATAAA AATAGCGCTT GTTTCGGCTT CTGCAAATGA TTCCCTAAAG
CAAACTAACA TTGTTGGCCG CATTATTAAC CCTGCCAAAA CCCACAAGGC TTATGCCGTA
TCGGGTGCAA TAGCCACATG TGTGGCAGCT TTCACCTCAA AAACTATAGT GCAGAACATG
AGCAGTGGCG TATTTGGCCT TGGGGCGGGC TTTAAAATTG GCCACCCTGA GGGAGTGCTA
GAGGTGGGTT TACAACATGA TGAAACTGAG CAGGGCGCTG TTATTCGCGC TGCGGAGATC
TATCGAACCT CGCGATTGCT AATGGTTGGG CAAGCTTTTA CCCCGCTTCA AGACAGCATG
TTGACTTCTG TTGGAACACG TAAAATAGAA AACATATTAT GA
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| Protein sequence | MAAIPCVIMR GGTSKGVYIN EAHLPAEAEA RDTLLCNLFG SSDPRQIDGI GGGDPLTSKV
AILAAPSHPD ADVDYISGEV RLRRHEVNYG IMCGNLAAGV GPAAVQMGLV DPQKCSHSVK
VFNRNSGSVI DAHYLQPLDS ELGTCFSAKL IFNNPIGNHT GCLLPTGNPV DMVSIRGITV
KYSVVDAGAV YAFVSANELD LKGCETPAEI DAMVLVREWV ELFRQHVAET INCLQVASKQ
VNVGQIKIAL VSASANDSLK QTNIVGRIIN PAKTHKAYAV SGAIATCVAA FTSKTIVQNM
SSGVFGLGAG FKIGHPEGVL EVGLQHDETE QGAVIRAAEI YRTSRLLMVG QAFTPLQDSM
LTSVGTRKIE NIL
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