| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0139 |
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| Symbol | |
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| ID | 3965369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 171293 |
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| End bp | 172180 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919198 |
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| Product | FkbH |
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| Protein accession | YP_525615 |
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| Protein GI | 90019788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATT CATCCGTAGT TCATGCAATG ACAGTCGACG TAGAAGATTA TTTTCACGTG
TCGGCATTCT ACAAGGTTAT TTCTCAAGGT GATTGGGATA AATGGCCAAC TCGTGTAGAA
GAAAACACGC TAAAGCTACT CGATTTATTT GAGCAGCGTA AAATTAAATG CACTTTTTTC
GTTTTGGGCT GGGTTGCCGA GCGCTTTCCT GAACTAATTC GTAAACTTTC AGAGCAGGGC
CACGAAATAG CTTCGCACGG CTATTCACAT CAACTGGTGT ACACCCAAAC ACCAGAAGTA
TTTCGAGAAG AAACTAAAAA GTCGAAAGAT ATATTAGAGC AAATTACTCA ACAACCTATT
TTAGGCTATC GCGCGGCAAG CTACTCTATA ACTCGTAAAT CGCTTTGGGC TTTGGATATA
TTAGATGAGC TTGGCTTTGA GTGGGATTCC AGTATTTTTC CAGTCCACCA CGATAACTAC
GGCGTACCTG GTAGCCCAAC ACAACCCTAT ACAATAGAAC TGGAAAACGG TAACAAAATT
ACTGAGTTTC CACTTACATC TGCAAAAGTA ATGGGCATGT CTATTCCTGC TGCAGGTGGC
GGCTATTTTA GACAATACCC ATATGCCTTA TCGCGCTGGC TTTTTGAACG CGCTTCAGTT
AATCAAACTC GTCCGCTTAT ATTTTATTTG CACCCTTGGG AGATAGACCC CGACCAACCG
CGCGTACCCA ATGCCAGCTT TAAATCTAAA TTTAGGCACT ACACAAATTT ACACCGTTGC
TATGGTCGCC TAGAGCGAAT GATCAACGAT TTTAACTTTG GTACTATTCA GCAGAGTTTA
GGCTCAGTAA ATATTGATCA AAATGTACAC ATAAGCACTT TGAGGTAG
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| Protein sequence | MSNSSVVHAM TVDVEDYFHV SAFYKVISQG DWDKWPTRVE ENTLKLLDLF EQRKIKCTFF
VLGWVAERFP ELIRKLSEQG HEIASHGYSH QLVYTQTPEV FREETKKSKD ILEQITQQPI
LGYRAASYSI TRKSLWALDI LDELGFEWDS SIFPVHHDNY GVPGSPTQPY TIELENGNKI
TEFPLTSAKV MGMSIPAAGG GYFRQYPYAL SRWLFERASV NQTRPLIFYL HPWEIDPDQP
RVPNASFKSK FRHYTNLHRC YGRLERMIND FNFGTIQQSL GSVNIDQNVH ISTLR
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