Gene Sde_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0137 
Symbol 
ID3965367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp168838 
End bp169752 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content45% 
IMG OID637919196 
Producthypothetical protein 
Protein accessionYP_525613 
Protein GI90019786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0482876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACAC AAATAGTACT TATAAGCACA CTTCTTGCCT TACCCTTCAC CGCTTTAAAT 
GCATCGCCAT TAGAGTGTAC GAACTGGCAA ACCGCACATC CAAATTGGCT TTGGTGTGAT
GACTTTGAAG TAGATAGTAG CTTAGAAGAA AATTACTTTG AAGTTTATCG CGCCAATGGC
AGATACGGCG TAGATAGCGA AGAAGCATTT GGCGGCAATG CCTCCTTACG CAGCGATTGG
GTACCGGGCT CCTCAGACGC AGGCAATTTG AAATTTAGTT TTGGTCGCAC TCCTGTTGCA
CAAAAGCGCT ACACAGATAC CAACTTTGAA ACCGTGCACT GGCGTTTCTA CATGAAAACG
GACAGCCGCT GGCAAGGGCA AGGTAACAAA ATAGCCCGTG CAATTTCATT TGCAGGTAAT
AATTGGTCTC AAGCGATGAT TGCTCACTTA TGGCAGGGGA GCAACCTTAA CATTGCAATC
GACCCCGCTT CTGGCACAGC AAGACCAGAA TCAAGTAGTG CAATTGCCAC CACAGGTTAC
AATGATTTTA ATAATTTAAA ATGGCTGGGA AAGGCTGAGG GAACTACCGA CATTTATAGC
GATGAGAACA AAACAAACTG GCATTGCATA GAAGTTGGCG TTGAGCTTAA TACACTCGGG
CAAGCCGACG GCACGTTCAA GTTGTGGATA AATGACGAAC TCGAAGCCGA ACGCACAAAC
TTAAACTGGC GCAGCAGTTT CGACACTTAC GGTATTAACG CAATTTTTCT TGAAAACTAT
AAGGGTGGAG GCTCGAGTGC GGAGCAATCT AGGTTTGTAG ATAACCTTGT TATTAGCACC
GAAAAAATAG GCTGCGTGAA TGCACTACCT TCACCACCTA TAACGCCGCC TAATTTTGAT
GTAGAAGAAA AGTAA
 
Protein sequence
MRTQIVLIST LLALPFTALN ASPLECTNWQ TAHPNWLWCD DFEVDSSLEE NYFEVYRANG 
RYGVDSEEAF GGNASLRSDW VPGSSDAGNL KFSFGRTPVA QKRYTDTNFE TVHWRFYMKT
DSRWQGQGNK IARAISFAGN NWSQAMIAHL WQGSNLNIAI DPASGTARPE SSSAIATTGY
NDFNNLKWLG KAEGTTDIYS DENKTNWHCI EVGVELNTLG QADGTFKLWI NDELEAERTN
LNWRSSFDTY GINAIFLENY KGGGSSAEQS RFVDNLVIST EKIGCVNALP SPPITPPNFD
VEEK