Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0137 |
Symbol | |
ID | 3965367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 168838 |
End bp | 169752 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919196 |
Product | hypothetical protein |
Protein accession | YP_525613 |
Protein GI | 90019786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0482876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACAC AAATAGTACT TATAAGCACA CTTCTTGCCT TACCCTTCAC CGCTTTAAAT GCATCGCCAT TAGAGTGTAC GAACTGGCAA ACCGCACATC CAAATTGGCT TTGGTGTGAT GACTTTGAAG TAGATAGTAG CTTAGAAGAA AATTACTTTG AAGTTTATCG CGCCAATGGC AGATACGGCG TAGATAGCGA AGAAGCATTT GGCGGCAATG CCTCCTTACG CAGCGATTGG GTACCGGGCT CCTCAGACGC AGGCAATTTG AAATTTAGTT TTGGTCGCAC TCCTGTTGCA CAAAAGCGCT ACACAGATAC CAACTTTGAA ACCGTGCACT GGCGTTTCTA CATGAAAACG GACAGCCGCT GGCAAGGGCA AGGTAACAAA ATAGCCCGTG CAATTTCATT TGCAGGTAAT AATTGGTCTC AAGCGATGAT TGCTCACTTA TGGCAGGGGA GCAACCTTAA CATTGCAATC GACCCCGCTT CTGGCACAGC AAGACCAGAA TCAAGTAGTG CAATTGCCAC CACAGGTTAC AATGATTTTA ATAATTTAAA ATGGCTGGGA AAGGCTGAGG GAACTACCGA CATTTATAGC GATGAGAACA AAACAAACTG GCATTGCATA GAAGTTGGCG TTGAGCTTAA TACACTCGGG CAAGCCGACG GCACGTTCAA GTTGTGGATA AATGACGAAC TCGAAGCCGA ACGCACAAAC TTAAACTGGC GCAGCAGTTT CGACACTTAC GGTATTAACG CAATTTTTCT TGAAAACTAT AAGGGTGGAG GCTCGAGTGC GGAGCAATCT AGGTTTGTAG ATAACCTTGT TATTAGCACC GAAAAAATAG GCTGCGTGAA TGCACTACCT TCACCACCTA TAACGCCGCC TAATTTTGAT GTAGAAGAAA AGTAA
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Protein sequence | MRTQIVLIST LLALPFTALN ASPLECTNWQ TAHPNWLWCD DFEVDSSLEE NYFEVYRANG RYGVDSEEAF GGNASLRSDW VPGSSDAGNL KFSFGRTPVA QKRYTDTNFE TVHWRFYMKT DSRWQGQGNK IARAISFAGN NWSQAMIAHL WQGSNLNIAI DPASGTARPE SSSAIATTGY NDFNNLKWLG KAEGTTDIYS DENKTNWHCI EVGVELNTLG QADGTFKLWI NDELEAERTN LNWRSSFDTY GINAIFLENY KGGGSSAEQS RFVDNLVIST EKIGCVNALP SPPITPPNFD VEEK
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