Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0135 |
Symbol | |
ID | 3967589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 167440 |
End bp | 168399 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637919194 |
Product | glycosyl transferases-like |
Protein accession | YP_525611 |
Protein GI | 90019784 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0498044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAACA AATTAATTAG TATTGTTGTG CCAGCCTACA ACGAGCAAGA AGTTATTACC CATTTTCACG AGCGACTAGC AGCCGTAATG AACGAAATGG CTAATTACCG TTGGGAAGTG GTATACGTTA ATGACGGCAG TAAAGACGAT ACATTAAAAA TATTGCATGG TTTAAGGGAT GCAGATGAGC ATGTTGCGGT GCTCAATCTT AGTAGAAATT TTGGTAAAGA AATTGCGCTA ACGGCTGGCC TAGATCATTC ATCTGGTGAC GCTATTGTAG TGATTGATGC TGATTTGCAA GACCCACCAG AGTTGATTCC AACACTCGTT GAGCGATGGG AGGAGGGTGC CGATGTAGCT TACGCAAAGC GTAAAAAACG CGATGGTGAA TCCGCCTTTA AAAAAGCGAC CGCTCATATT TTCTATCGGT TTATGGCTAA AATTGGCGAT GTAGTACTTC CAGAAGATAC GGGTGATTTT AGACTCTTAA ATAGAAAAGC GTTAGATGCC TTAAATAGCG TACGCGAGCG CCATCGTTTT ATGAAAGGCT TGTTTGCTTG GATAGGCTTT CATCAAGTAG CAGTTGAATA CGATAGAGAC CCTCGCTTTG CTGGGGTAAC TAAGTGGAAT TACTGGAAGC TGTGGAACTT AGCGTTAGAA GGGTTTACTT CATTTACCAC TATGCCGTTA AAACTAGCTA CCTACATTGG TGTACTTACA GCATTTGGTT CATTTGTGTA TGGCTTGTAT ATGATTATCA CCACATTAAT TAATGGTAAC GATGTAGCGG GTTACCCATC GCTGGTAGTA ATAGTGCTAT TCCTTGGCGG TATTCAATTA ATGAGTATTG GTGTAATAGG TGAATATTTG GGGCGTATAT TTAACGAAAC TAAAAAACGC CCACTGTACT TTACAAATGA ATGGGTGCCC AGCCGCGAAA ATAAAACAAT ATCGGAATAG
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Protein sequence | MTNKLISIVV PAYNEQEVIT HFHERLAAVM NEMANYRWEV VYVNDGSKDD TLKILHGLRD ADEHVAVLNL SRNFGKEIAL TAGLDHSSGD AIVVIDADLQ DPPELIPTLV ERWEEGADVA YAKRKKRDGE SAFKKATAHI FYRFMAKIGD VVLPEDTGDF RLLNRKALDA LNSVRERHRF MKGLFAWIGF HQVAVEYDRD PRFAGVTKWN YWKLWNLALE GFTSFTTMPL KLATYIGVLT AFGSFVYGLY MIITTLINGN DVAGYPSLVV IVLFLGGIQL MSIGVIGEYL GRIFNETKKR PLYFTNEWVP SRENKTISE
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