Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0133 |
Symbol | |
ID | 3967587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 164554 |
End bp | 166077 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637919192 |
Product | hypothetical protein |
Protein accession | YP_525609 |
Protein GI | 90019782 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCGC AACAGTTAAA AGATTTAGCT CAAGCCATTT GGCTTGAGCT CGTTCACTAT AAAGAATGGT GTGTAGCTAT TTTTATAGTT GTAAGCCTAG CTGCAATTGG CTTGGGGTAT ACCTGGCCGC AAAGTTATAA AACTAGTGCT GTACTGAATG CGGATGAGCA AAACATCATC GCACCACTAC TTAGTGGTCG TGCGGAGGTA ACCAAGGTAG ATCGCTCGCA AGACGCTAAA GAAGTTATCT ATACGCGTAC ATTTTTAGAG AAAGTAGTTA AAGAAAGTGG CTTGCTCGAA GGAGAACCAA GCCCAGATGC AATAGAAAGA AAAATTTATG CTTTGCGCAG TACAATAGAA GTTTCTTCTG TTAATAAAAA TTATTTTAGA GTTAGTTATA CCGCGCCAAG CCCCGATAGA TCTTTCACTG TTTTAAGTGA AACTGTTAGG CAATTTGTTG AGCACACCGC TAAGCAAAAG AAGGAAGAAA GTTACTCTGC TTATCAGTTT ATTGATTCGC AAGTGCAAGC TTACAAAAGA CAGCTTGAAG ATGCCGAAGA AAAACTAAAG ATATTTAAAT CGGGCAATAT AGACGGAAGC GAAGCATCCG TTTCTAGCCG AATTTCTCAA CTTCGAACAG AAATAGAAAA CTTAAAGCTG TCTATAGATG AAACAAATTC AAGGTTAAAA ACAGTACAAA GCCAGTTAGA TAACGAATCT TCATATTTGC AGGCTCGTTC GAAATTGGAT TCATTAGAGC AGCGCAAATC TGGTTTGAAT ACTGAACTAG AAAATTTGCG TCTGTCTTAT CAAGAAAATT ACCCCGATGT TGTATCTCTA AAGTTGCAAA TTGCAGAGCT AGACAAACGC ATTGAAGAAA TATACCGCTT AGACGGAGTA ACTACTTCGG GTAGCAGCAG TACCGAACAA AACCCGCTCT ACGAAGAACT GCGTAAGCAA ATGGCCGTGG CTGAAGTAGA TCTGCGTACG CAGAAACAAC GCAAAGCTTC TTTAGAGCGA TTGCTTGAGC AAGAGTATGC CCGAGCAGAG AAAATAGCCG CAAACGAAGC AGAGCTATCG GAGCTTACGC GTGATTACGA TGTAACTAAG CGCGTTTATG AAGAGATGCT CGATAGAAAA GAAAAAGCTA GAATGTCTAT GGCGTTAGAT GTGGAAGGCC AAGGTGTAAG CTACAAAATT CACGAGCCAC CGGTTTATCC GTTGCAGTCT ACGGGCCTAA AGTTTATTCA CTTCGCAATA ATAGGGCCTA TTCTTGGCTT TATAATACCA ATAGGTCTGG TTATAGCTTT AATTATGCTC GACCCTCGAA TACGTTCTGG TCTTGCTCTA GCGTCAAAAT TTGAAGATGA AGTTGAAGTA ATCGGTACTA TTCCTCATAG CTCCACAGCG CTAGCTAAGC GTGTGGTGCG GCGAGATGCA GTAATAATCA TTGGTGTAAC GCTTTGTTTT CTTGCGCTGT ATGCCGTTAT TGTGGCCAAT AAACTGTTTA GTTCTACCTT ATAA
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Protein sequence | MDPQQLKDLA QAIWLELVHY KEWCVAIFIV VSLAAIGLGY TWPQSYKTSA VLNADEQNII APLLSGRAEV TKVDRSQDAK EVIYTRTFLE KVVKESGLLE GEPSPDAIER KIYALRSTIE VSSVNKNYFR VSYTAPSPDR SFTVLSETVR QFVEHTAKQK KEESYSAYQF IDSQVQAYKR QLEDAEEKLK IFKSGNIDGS EASVSSRISQ LRTEIENLKL SIDETNSRLK TVQSQLDNES SYLQARSKLD SLEQRKSGLN TELENLRLSY QENYPDVVSL KLQIAELDKR IEEIYRLDGV TTSGSSSTEQ NPLYEELRKQ MAVAEVDLRT QKQRKASLER LLEQEYARAE KIAANEAELS ELTRDYDVTK RVYEEMLDRK EKARMSMALD VEGQGVSYKI HEPPVYPLQS TGLKFIHFAI IGPILGFIIP IGLVIALIML DPRIRSGLAL ASKFEDEVEV IGTIPHSSTA LAKRVVRRDA VIIIGVTLCF LALYAVIVAN KLFSSTL
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