Gene Sde_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0125 
Symbol 
ID3967579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp156757 
End bp157725 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content52% 
IMG OID637919184 
Productmagnesium transporter, putative 
Protein accessionYP_525601 
Protein GI90019774 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG CGTTAATCTA TAGCTATTTA TTAGATGGTA AAGGCGGCGG CAAATCGATG 
ACTGCCGAAG AAATTACCCA GTGGCAACCC AGCGATGGGC TGCTGTGGGT ACATCTAGAT
TACAGCGTAG AAGGCGCCCC CGAGTGGATA TTTGCGCAAA AAGACTTACC CAATGTGTGT
GCTCAAGCCC TGCTGCACGA AGAAACCCGT CCACGTGCTA CTTTGGTGGG TAGCGGCATA
TTAATGTCTT TGCGCGGCGT GAACTTAAAC CCCAGCGCCG ACCCGGAAGA CATGGTATCT
ATTCGGGTTT ATGCCGATAA AAACCGCATT ATTAGCACCC GTCACAGGCG TTTGCTAACC
GTAGCCGACA TAGTTACCAG CCTAGATGAA AACCGCGGCC CCAAAGATAG CGGCGAATTT
ATTCAAGAGT TGGTGCGCGG CCTTACGTTG CGCATGGAAA CCACCATAGA CATGTTGGAA
GAGCGCACAG ACGACTTAGA AGACACAGTC ATAGCAGGCG GCAAAAACGG GTTGCGCAGC
GAGCTTTCTG CCGTGCGTCG CGCCGCAATT ATGTTGCGCC GCTACTTGGC CCCGCAGAGG
GAGGCGCTAT CGCGATTGTG TGGTGAGCAA GCGCCGTGGC TAACCGAAAC ACACCGCATA
GGCCTGCGCG AAACCTCCGA CCATTTATTA CGCCTGCTAG AAAACTTAGA TTCTGCCCGC
GATCGCGCTG CCGTAGTGCA AGAAGAGCTG GTGAATCATA TGTCCGAGCA GATGAACCAG
CGCATGTATG TGCTTTCGTT GGTGGCGGCC ATCTTTTTGC CGCTTGGCTT CTTAACGGGG
CTACTGGGCA TAAACGTAGG TGGCATACCT GGCGCCGAAA ATAACCAAGC ATTTTTCTGG
TTTATTGCTA TCCTTTGCAG CCTTACCGCC TTGCAGGTGG TGGTGTTTAA ACGATTTAAG
TGGATGTAA
 
Protein sequence
MEKALIYSYL LDGKGGGKSM TAEEITQWQP SDGLLWVHLD YSVEGAPEWI FAQKDLPNVC 
AQALLHEETR PRATLVGSGI LMSLRGVNLN PSADPEDMVS IRVYADKNRI ISTRHRRLLT
VADIVTSLDE NRGPKDSGEF IQELVRGLTL RMETTIDMLE ERTDDLEDTV IAGGKNGLRS
ELSAVRRAAI MLRRYLAPQR EALSRLCGEQ APWLTETHRI GLRETSDHLL RLLENLDSAR
DRAAVVQEEL VNHMSEQMNQ RMYVLSLVAA IFLPLGFLTG LLGINVGGIP GAENNQAFFW
FIAILCSLTA LQVVVFKRFK WM